Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02576 ATGGCAACCCAAAGTGAAGAAAATGCTACAAAATTCCTTCAAGCTTATACCCAGATTGATGATCATAGTTTGAGATTCATACACTCCATGTCCCTTAAATGTGCAATTGACTTAAGCATACCAGACATCATACACAAGTATGGCCAACCCATGCCACTCTCACAACTCATTGCTTCACTACCAATCCACCCATCCAAGACTTGCTACATCCATCGCTTGATGCGACTCTTTACTCATTCCGGTTTCTTCTCTCGGCACGATTTGGTCGAAAACGAACAAGAAGTGATCACGTATGAGCTAACTGATGCATCTAGACTACTCCTCAAGGACCACCCTTTTAGTTTGAGGCCTTTGTTGCTAGTCACACTTGATCCAAGTGTGATTAAGTCATGGTGTCAATTCTCTACTTGGCTCACAAGTGAAGACCGTACACCGTTTCAAACGGAGAATGGGGTGACATATTTTGATTATGCTAAGCGTGACCCCAAATTCGGTCACTTTTACAATGATGCAATGGCTAAGGACACTCGATTCGCTTCTAGTGTGGTGATTGAAAACTACAAGGAAGTGTTCGAGGGATTGAAGTCAATTGTTGATGTTGGAGGAGGAATAGGGACCATGGCTAAGGCCATTGCTAAGGCATTCCCACAAGTGAAGTGCACTGTGTTTGATCTCCCACATGTTGTTGATGGCTTGCAAGGAACAGAAAACATAGAATATGTTGGAGGAGACATGTTTGAAGTAATTCCTGCAGCTGATTGCATTATGCTGAAGTGGGTATTGCATTGTTGGAATGACGAGGAATGCATGAAAATATTGAAGAAATGCAAGGAGGCAATACCTAGCGACGGAAAGGTTATCATCATGGAATTAGTGATGGAGCATAACAAGGAAGACAATAAATTAATTGAGATGCAGCTGTGCTGTGATATGCTTATGATGTCGCTTTTTGCAGGAAAAGATAGAACTGAGAAAGAATGGGCACATCTGATTGCCTCTGCTGGTTTCAGTAACTACAAGATAACTCATATTTTCGATTTATATCATATCATTGTGGTTTATCCCTAG 1068 0.4157 MATQSEENATKFLQAYTQIDDHSLRFIHSMSLKCAIDLSIPDIIHKYGQPMPLSQLIASLPIHPSKTCYIHRLMRLFTHSGFFSRHDLVENEQEVITYELTDASRLLLKDHPFSLRPLLLVTLDPSVIKSWCQFSTWLTSEDRTPFQTENGVTYFDYAKRDPKFGHFYNDAMAKDTRFASSVVIENYKEVFEGLKSIVDVGGGIGTMAKAIAKAFPQVKCTVFDLPHVVDGLQGTENIEYVGGDMFEVIPAADCIMLKWVLHCWNDEECMKILKKCKEAIPSDGKVIIMELVMEHNKEDNKLIEMQLCCDMLMMSLFAGKDRTEKEWAHLIASAGFSNYKITHIFDLYHIIVVYP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02576 355 CDD AdoMet_MTases 197 289 - -
Gma06g02576 355 SUPERFAMILY "Winged helix" DNA-binding domain 11 112 IPR036390 -
Gma06g02576 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
Gma06g02576 355 Gene3D Vaccinia Virus protein VP39 108 355 IPR029063 -
Gma06g02576 355 Pfam O-methyltransferase domain 136 337 IPR001077 GO:0008171
Gma06g02576 355 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Gma06g02576 355 Gene3D - 1 107 IPR036388 -
Gma06g02576 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 353 IPR029063 -
Gma06g02576 355 PANTHER O-METHYLTRANSFERASE 7 355 IPR016461 GO:0008168
Gma06g02576 355 PANTHER ORCINOL O-METHYLTRANSFERASE 7 355 - -
Gma06g02576 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 355 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02576 Gma-Chr6 48990983 48993458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02576 30 341 Monolignol Biosynthesis Gene Families AT5G54160 34.700 1.71e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02576 - K16040 gmx:100795012 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02576 06 48990983 48993458 Gma06g02576 06 48990983 48993458 ECH