Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02567 ATGGCTTCCAACAACAACAGCAGCAgcagcagcatcatcgtccaacattgcaactactcttcatatgacgtgtttgtgagcttcagaggtaaggacacacgcaacaattttactgatcatctttttggtgcattccataggaaaaaaattcgtacatttagggatgacacaaggctgaagaaaggggaacgtatactatccaacctcatgcaagcaattgaggggtctcagatttttgtcattgtcttctcaaagaactatgctttttcatcatggtgcttgaaagaacttgctaagatccttgattgtgttagagtctccggaaaacatgttctgcctattttttacgatgttgatccatctgaagtgcgaaatcagacgggggattatgagaaagccttcgccaaacacgaagatagagagaagatggaggaagtgaaaagatggagagaagctctcacacaagtagccaatctcgctggttgggatatgaggaataagtcacaatatgctgagattgaaaaaattgttcaagagataataagtaaattgggtcacaatttttcaagtcttccaaatgatctagttgggatggaatctcctgttgaagaattagaaaaacttttacttttggacctaactgatgatgttcgcattgtaggaatttgtgggatgggtggaataggaaagacaactcttgctactgttttatatgatagaatctctcatcaatttgatgctcactgtttcattgataatgtaagcaaaacttatagacattgtggccaaattggtgttctaaagcagctgcttcatcaaactctaaatgaagaccttcagatatgcaatctttaccacgcagctaatttgatgcaaagtaggctacgctatgtaaagagcattatagttcttgataatgttaatgaagttgaacaactagagaaattagttttgaatcgtgaatggttaggtgcagggagtagaatcatcataatttctagagacaagcatgtcttgaaaaagtgtggagtgactgtagtctacaaagttcaactcttgaatggtgctaattctcttaaattgttctgtaaaaaagctttcgattctgttgatatcacgggagattatgaagagttgaaatatgaagtcttaaaatatgccaatgacctaccactagcaattaaagtactaggttcggttttgtctggtcgaagtgtctcatattggagaagttacttggatagacttaaagagaatcctaacaaagatattctggatgtgcttcgaattagttatgatgaacttcaggatttggaaaaggaaatatttttagatattgcttgtttcttctgtggaaacgaagaattatatgtgaagaaagttttagattgttgtgggtttcattctgaaattggaataagagccctcgttgataaatcactcatagataattcaagtggattcattgaaatgcataatttgttgaaagttttaggcagaacaattgttaaaggcaatgcacccaaagagccaggaaagtggagcagggtttggctccacgaagatttctacaatatgtcgaaggcaacgGAAACAACAAACAATGAAGCCATTGTTTTAGACAGAGAGATGGAAATATTGATGGCTGATGCTGAagcattgtccaaaatgagcaaccttaggttgctcatattccgtgatgtgaagtttatgggaatacttaattcagttaattgtctctccaataaactacaatttcttgagtggtataactatcctttctcctatttgccatcaagttttcagccgaacctgctggttgaattgatcttgcaacatagcaacatcaaacaattatggAAAGGCATAAAGCATCTGCCAAATTTAAGAGCTTTGGatctcagttactccaagaatcttattgaggctccagactttggaggggtccttaatcttgagtggataattcttgaaggatgcacaaatcttgcacggatccatccatcagttggacttctaagaaaacttgctttcttgaatttgaaaaactgcattagtctagtaagtctacccagcaacatattgagtctaagttctcttggatatctaaatatctctggctgtccaaaagtATTTAGTAATCAGCTGTTAGAGAAACCAATACATGAGGAGCATTCTAAGATGCCTGATATCAGGCAAACTGCCATGCAATTTCAATCAACATCCTCCTCCATCTTCAAGAGACTTATTAATTTAACTTTCCGTTCCTCCTACTATTCTAGAGGGTATAGAAATTCAGCTGGTTGTTTGTTGCCTTCCTTGCCTACCTTCTTTTGTATGCGTGACCTTGATCTAAGTTTCTGCAATCTAAGCCAAATCCCTGATGCTATTGGATCCATGCATTCTTTAGAAACCTTGAATTTAGGGGGAAACAACTTTGTTAGCCTCCCTTATAGCATCAACCAGCTTTCAAAACTTGTACATTTAAACTTGGAGCATTGTAAGCAATTGAGATATTTTCCTGAGATGCCATCACCTACTTCCTTGCCCGTAATAAGAGAAACCTACAACTTTGCTCATTACCCTAGGGGATTATTTATTTTTAACTGTCCTAAAATAGTTGACATTGCACGTTGTTGGGGCATGACTTTTGCATGGATGATACAAATTCTTCAGGTTAGCCAAGAATCAGATACCCGTATTGGTTGGATTGACATTGTTGTTCCGGGAAATCAAATACCAAAATGGTTCAACAATCAAAGTGTTGGTACTTCAATAAGCCTAGACCCATCTCCCATTATGCATGGCAATCATTGGATTGGCATTGCTTGCTGCGTGGTATTTGTGGCATTTGATGATGCAACTGATTTGCATCCGAATTTGAGATCCTCTATAAGAATTGGTTTTAAAACAGAGTCCTACTCTTCCTCTCTTGATATTCCTATACTTATTAATAAGGATCTAGTAACGGTCGGATTGCATCACTTGTGGCTACTCTATTTGAGTAGGGAGGAGTTTTTTTCCTATTTTAAAATAGAAAAAATGCTTGATCTTCACGGCATCAAAATGCAATCCACCGTCTGGCACTCTCAAGGTTTAAATTTGGAGGTGCACGGTTGCGGATATCAGTGGGTATTTAAGGAGGATTTGGACACCCTAAACCTAACAATAATGCGAAGAGGATACAACGAAACTCACGTTGATGATGATTTTGTGAAGGGCGTTTCAATCCTTTCTTTGGAAGATGGAAACTAG 3255 0.1499 MASNNNSSSSSIIVQHCNYSSYDVFVSFRGKDTRNNFTDHLFGAFHRKKIRTFRDDTRLKKGERILSNLMQAIEGSQIFVIVFSKNYAFSSWCLKELAKILDCVRVSGKHVLPIFYDVDPSEVRNQTGDYEKAFAKHEDREKMEEVKRWREALTQVANLAGWDMRNKSQYAEIEKIVQEIISKLGHNFSSLPNDLVGMESPVEELEKLLLLDLTDDVRIVGICGMGGIGKTTLATVLYDRISHQFDAHCFIDNVSKTYRHCGQIGVLKQLLHQTLNEDLQICNLYHAANLMQSRLRYVKSIIVLDNVNEVEQLEKLVLNREWLGAGSRIIIISRDKHVLKKCGVTVVYKVQLLNGANSLKLFCKKAFDSVDITGDYEELKYEVLKYANDLPLAIKVLGSVLSGRSVSYWRSYLDRLKENPNKDILDVLRISYDELQDLEKEIFLDIACFFCGNEELYVKKVLDCCGFHSEIGIRALVDKSLIDNSSGFIEMHNLLKVLGRTIVKGNAPKEPGKWSRVWLHEDFYNMSKATETTNNEAIVLDREMEILMADAEALSKMSNLRLLIFRDVKFMGILNSVNCLSNKLQFLEWYNYPFSYLPSSFQPNLLVELILQHSNIKQLWKGIKHLPNLRALDLSYSKNLIEAPDFGGVLNLEWIILEGCTNLARIHPSVGLLRKLAFLNLKNCISLVSLPSNILSLSSLGYLNISGCPKVFSNQLLEKPIHEEHSKMPDIRQTAMQFQSTSSSIFKRLINLTFRSSYYSRGYRNSAGCLLPSLPTFFCMRDLDLSFCNLSQIPDAIGSMHSLETLNLGGNNFVSLPYSINQLSKLVHLNLEHCKQLRYFPEMPSPTSLPVIRETYNFAHYPRGLFIFNCPKIVDIARCWGMTFAWMIQILQVSQESDTRIGWIDIVVPGNQIPKWFNNQSVGTSISLDPSPIMHGNHWIGIACCVVFVAFDDATDLHPNLRSSIRIGFKTESYSSSLDIPILINKDLVTVGLHHLWLLYLSREEFFSYFKIEKMLDLHGIKMQSTVWHSQGLNLEVHGCGYQWVFKEDLDTLNLTIMRRGYNETHVDDDFVKGVSILSLEDGN 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02567 1084 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 446 IPR027417 -
Gma06g02567 1084 ProSiteProfiles Leucine-rich repeat profile. 802 823 IPR001611 GO:0005515
Gma06g02567 1084 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 162 IPR035897 -
Gma06g02567 1084 Gene3D - 170 348 IPR027417 -
Gma06g02567 1084 PRINTS Disease resistance protein signature 219 234 - -
Gma06g02567 1084 PRINTS Disease resistance protein signature 294 308 - -
Gma06g02567 1084 PRINTS Disease resistance protein signature 387 401 - -
Gma06g02567 1084 PRINTS Disease resistance protein signature 624 640 - -
Gma06g02567 1084 ProSiteProfiles TIR domain profile. 20 184 IPR000157 GO:0007165
Gma06g02567 1084 SMART till_3 21 159 IPR000157 GO:0007165
Gma06g02567 1084 Pfam TIR domain 22 190 IPR000157 GO:0007165
Gma06g02567 1084 Gene3D - 1 157 IPR035897 -
Gma06g02567 1084 SUPERFAMILY L domain-like 507 875 - -
Gma06g02567 1084 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 192 1008 - -
Gma06g02567 1084 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 192 1008 IPR044974 GO:0006952
Gma06g02567 1084 Pfam NB-ARC domain 200 424 IPR002182 GO:0043531
Gma06g02567 1084 Gene3D Ribonuclease Inhibitor 546 729 IPR032675 -
Gma06g02567 1084 Pfam Leucine Rich Repeat 606 624 IPR011713 -
Gma06g02567 1084 Pfam Leucine rich repeat 781 835 IPR001611 GO:0005515
Gma06g02567 1084 Gene3D Ribonuclease Inhibitor 730 860 IPR032675 -
Gma06g02567 1084 Gene3D - 353 436 IPR042197 -
Gma06g02567 1084 Pfam C-JID domain 908 1049 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02567 Gma-Chr6 48865569 48871096 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02567 22 829 WRKY Transcription Factor Family AT4G12020 30.639 1.64e-85 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02567 - - gmx:100786903 2149.4