Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02562 ATGCATCCAGCATGTGCAGCATGCAAGCATCAAAGGAAGAAATGCAGTGAAAACTGTATATTGGGACCTTACTTTCCATCAAATAAAAACCAAGAGTTCCATGCTGTGCACAAGGTTTTTGGTGTTAGCAACATTACCAAGTTGGTAAAGAATGCTAAAACGGAAGATAGAAGAAAAGTTGTGGACTCATTGATATGGGAAGCATGTTGTAGGCAAAGGGACCCTATACAAGGTCCTTATGGAGAGTACACAAAAGTTTACAACGAGTATAAGAAAGTGTTGGATGAACTTAAGAGATTCAAAAGCCAAAACCAGCTTTTGCAAATTCCCTCTCTAGGATTAAAGTCTGTACAAGGTTTGATTACTTGCAGTGAAACCAAAGGGGAACACAAAGCGACCATTGATAGTGCGTTGGATTATCTTCATGGGAAAAAGAATGGTATTATTGATTCTGATAATTATAATACTTATTGTTCGAATTATTTGCAAGAGTTTCAAAATATGAGGCCTGAAGTTGTCATACCGTTTCGACAACACTCTCAATCATACTACACTACAGGAGCCACCCGCGTCACCGAACTCGCCCTCAACCCATCGGGTTACACGAGCCCACTCGTCATAAACCATCCCAACAACAACAACAACAACCACCACCACCACCTCCCATTCCTCCAAACCCTCGACCTCTCCAAGAACTACTTCTTAGAGATATTTGACTGA 720 0.4097 MHPACAACKHQRKKCSENCILGPYFPSNKNQEFHAVHKVFGVSNITKLVKNAKTEDRRKVVDSLIWEACCRQRDPIQGPYGEYTKVYNEYKKVLDELKRFKSQNQLLQIPSLGLKSVQGLITCSETKGEHKATIDSALDYLHGKKNGIIDSDNYNTYCSNYLQEFQNMRPEVVIPFRQHSQSYYTTGATRVTELALNPSGYTSPLVINHPNNNNNNHHHHLPFLQTLDLSKNYFLEIFD 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02562 239 Pfam Lateral organ boundaries (LOB) domain 4 100 IPR004883 -
Gma06g02562 239 ProSiteProfiles LOB domain profile. 3 104 IPR004883 -
Gma06g02562 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 181 - -
Gma06g02562 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 2 2 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02562 Gma-Chr6 48821339 48825969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02562 2 102 AS2 family AT1G06280 57.426 6.12e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma06g02562 LOB 9.5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02562 - - gmx:100809173 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02562 06 48821339 48825969 Gma06g02562 06 48821339 48825969 ECH