Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02560 ATGGCTCAATTGCCACCAAAAATTCCAAACATGACACCCAATTGGCCAGACTTCTCTTCTCCTCACCAAAAGATGCCTTCCCTCAAAACCATGTCACCTAACCAAAACCCTTCATGGGTGGATGAGTTTCTTGAATTCTCCGCGGCGAGACGTGGGGCCCACCGGCGGTCGGTGAGCGACTCCATCACCTTCTTGGAGGCACCATTGCTGGACCACCATCATTGCAAAGGTGGCAGTGTTGGTGGTGGTGGCGGTAGCGGCGACAACGAGTTCGAGAGGTTTGATGATGAACAATTCATGTCCATGTTTAGTGATGAGGCTTCAGGGaataataataataataataataataataataataataataataCCATGATGGAAAACGCGTTATCCTCTTCCAACCCTTCTACACCTTCCGATCACAACAGCATCAATGATGAGAAGGAAATGAACAACAAGGAAGAGGAAGGGAAGAAGCAAGTGAAGAATGAGTCCGAGGAGGATGAGGATGAAAGCCAATGCAAACAAGAAATCACGCAACTTCCCAACAATGATGATAGTAAAAACAATAGTAATGCAAATGCAACATGTTCTAGTGAGAAAATCACAGACCCCAAGAGGGTCAAAAGAATCTTGGCAAATAGACAATCTGCGCAAAGATCAAGAGTGAGGAAACTGCAATACATATCTGAGCTTGAGCGAAGTGTGACTTCATTACAGGCCGAAGTTTCAGTGTTGTCTCCACGGGTTGCATTTTTGGATCATCAACGTTTGCTTCTGAATGTTGACAATAGTGCTTTGAAGCAAAGAATCGCAGCGCTGGCCCAAGACAAGATTTTCAAAGATGCACATCAAGAAGCACTGAAGAGGGAGATAGAGAGACTTAGGCAAGTTTATCACCAACAAAACATAAAGAAGATGGACAATGCTGCAGGGTCACCACCATCCCAATCCCCACCATCTCCATCACCAAAACCACGATGTGAAACTCACACTGAAAAGGAACAGCTTATCAATGTTTGA 1023 0.4389 MAQLPPKIPNMTPNWPDFSSPHQKMPSLKTMSPNQNPSWVDEFLEFSAARRGAHRRSVSDSITFLEAPLLDHHHCKGGSVGGGGGSGDNEFERFDDEQFMSMFSDEASGNNNNNNNNNNNNNNTMMENALSSSNPSTPSDHNSINDEKEMNNKEEEGKKQVKNESEEDEDESQCKQEITQLPNNDDSKNNSNANATCSSEKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKKMDNAAGSPPSQSPPSPSPKPRCETHTEKEQLINV 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02560 340 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 204 256 IPR004827 GO:0003700|GO:0006355
Gma06g02560 340 MobiDBLite consensus disorder prediction 104 201 - -
Gma06g02560 340 MobiDBLite consensus disorder prediction 142 169 - -
Gma06g02560 340 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 209 224 IPR004827 GO:0003700|GO:0006355
Gma06g02560 340 CDD bZIP_plant_RF2 207 257 IPR044759 GO:0003700|GO:0006355
Gma06g02560 340 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 337 - -
Gma06g02560 340 SUPERFAMILY Leucine zipper domain 206 260 IPR046347 GO:0003700|GO:0006355
Gma06g02560 340 MobiDBLite consensus disorder prediction 299 340 - -
Gma06g02560 340 Coils Coil 285 305 - -
Gma06g02560 340 MobiDBLite consensus disorder prediction 104 141 - -
Gma06g02560 340 Coils Coil 144 171 - -
Gma06g02560 340 MobiDBLite consensus disorder prediction 176 201 - -
Gma06g02560 340 MobiDBLite consensus disorder prediction 13 34 - -
Gma06g02560 340 Pfam bZIP transcription factor 206 250 IPR004827 GO:0003700|GO:0006355
Gma06g02560 340 PANTHER BASIC LEUCINE ZIPPER 34 1 337 - -
Gma06g02560 340 Gene3D - 205 276 - -
Gma06g02560 340 SMART brlzneu 202 266 IPR004827 GO:0003700|GO:0006355
Gma06g02560 340 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02560 Gma-Chr6 48797659 48800939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02560 1 283 bZIP Transcription Factor Family AT3G58120 57.655 1.72e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma06g02560 bZIP_2 4.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02560 - - gmx:778128 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02560 06 48797659 48800939 Gma06g02560 06 48797659 48800939 ECH