Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02540 ATGCGTCCACCGCGTAAGAGGGTGGATTTCGCGCGCGACGACAAGGTGGAGATCTGCGGCAACGAGGATGGCTTCCTCGGCTCCTACTACCAAGCCACGGTCGTGTCGCGCCTCGACAACGGCCTCTACGTCGTACGCTACGACACGCTCCTCGAAGACGACGCATCACAACAACCCCTTACCGAAACCCTTTTCCCCAAAGAACTCCGTCCCCAGCCGCCACGTGTCTCCAAAACCGATTTCGCGCTCTACCAGTGCGTCGACGCCTTCGACAACGACGGCTGGTGGCTCGGCCAGGTCACCGGAAAAAAAGACGCCGAGCATTACTACGTGTATTTTTCTACCACTAATGAGGAGATTGCGTATCATGTTTCTGCGATTAGGGTTCATCATGAGTGGAGCCATGGGGAGTGGGTTTTGTCCAATTGA 429 0.5618 MRPPRKRVDFARDDKVEICGNEDGFLGSYYQATVVSRLDNGLYVVRYDTLLEDDASQQPLTETLFPKELRPQPPRVSKTDFALYQCVDAFDNDGWWLGQVTGKKDAEHYYVYFSTTNEEIAYHVSAIRVHHEWSHGEWVLSN 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02540 142 PANTHER - 7 140 - -
Gma06g02540 142 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 7 140 - -
Gma06g02540 142 SMART agenet_At_2 8 77 IPR014002 -
Gma06g02540 142 SMART agenet_At_2 79 135 IPR014002 -
Gma06g02540 142 Pfam Agenet domain 13 74 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02540 Gma-Chr6 48423464 48424431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02540 22 136 PHD Transcription Factor Family AT5G58610 30.882 1.85e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02540 - - gmx:121175082 304.293