LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma06g02499	ATGGCTACTACCATAACAGAGCAAGAAGCCTCATCACGTGCCCCGCACGTGCTCGACTACGCCACCACTACATCCGACGACGACACGGAAAAGGAGGAGGAGGAGCTGGTACACGAGCAAAACGAATCCtccggcggagggcggtggtttccggcggcgtgcggtggCGGCACGCGGCGGAGCGGGGGAGGCGCGTTAGGGCGAGTTCTTGACCCAAGGGCGAAGTGGGTCCAGGAATGGAACAGGGTGTTCCTGCTAGTGTGCGCCGCGGGGTTGTTCGTTGACCCTCTCTTCTTCTACGCGCTCTCCGTCAGCGACTCGTGCATGTGCGTCTTCGTTGACGGGTGGCTCGCCGTCACCGTCACGGTGCTGCGGTGCATGACCGACGCACTGCACGTGTGGAACATGGTTATAAGGTGCAAGATGGCGAAACGCACCTTCGGACTCGGCGCCTCCACCACTTCTTCCGGCAGAGGAACATCCTCGTCCTCTGTCGGACTCAGAGATACCCGACCGCGTTCCGTCGCGATGGGATATCTCATGTCACGGACCGGATTCTTTTTTGATCTGTTCGTTATTCTTCCTCTACCACAGATTGTACTATGGGTGGCAATCCCCTCCTTGTTGGAGAAAGGTTCAGTGACATTGGTGATGACAGTGTTCTTAATTATCTTTCTCTTCCAATACCTTCCCAAAATTTTTCATTCGGTTTGCCATTTGCGACGCACGCAAAACCTCTCTGGCTACATTTTTGGAACAGTTTGGTGGGGAATCGCCCTTAACATGATCGCGTATTTTGTTGCTTCCCATGCAGCAGGGGCATGTTGGTACTTGCTAGGGATACAAAGGGCAGCCAAGTGTCTCAAAGTGCAGTGTGAGAAAACAAGTGGTTGTGGCATGAAAATCTTGTCTTGTCAAACACCCATATATTACGGAAGCAACAGTTTTCTAGTTAGGGATAGGGCAAGGTTGGCTTGGGCAGAGAACAGGGAAGTGAGACACACATGCCTAAATGGTCCTGACAACTACAACTATGGAGCTTATAGATGGTCTGTTCAGCTTGTCACAAACGATAATCGATTGGAGAAGATACTTTTCCCTATCTTCTGGGGCCTAATGACTCTCAGCACTTTTGGAAACCTAGAGAGTACAACCGAATGGCTGGAAGTAGTTTTCAACATCATTGTGCTGACCAGTGGCCTTCTTCTTGTCACTATGTTGATTGGAAACATCAAGGTATTTTTGCATGCAACAACGTCAAAAAAGCAAGCAATGCAATTGAAGATGAGGAATATTGAATGGTGGATGAGGAAACGACGCTTGCCGCTAGGGTTTAGGCAGCGCGTGCGTAACTATGAGAGGCAACGTTGGGCTGCCATGCGTGGGGTTGATGAATTTGAGATGACTAAAAATCTTCCTGAGGGATTAAGAAGAGACATTAAATACCATCTTTGTCTAGACTTGGTGAGACAGGTGCCTCTATTTCAACACATGGACGATCTGGTTCTAGAGAACATCTGTGACCGTGTGAAGTCTCTGATATTCACAAAGGGAGAAACAATAGCTAGAGAAGGAGACCCAGTTCAGAGAATGCTATTTGTAGTAAGGGGTCACCTTCAAAGCAGCCAAGTCCTAAGGGATGGTGTGAAGAGTTGTTGCATGTTAGGTCCAGGAAACTTCAGTGGGGACGAACTCCTCTCATGGTGTTTAAGGAGACCCTTCATAGAACGCCTTCCACCATCTTCATCCACACTCATCACGTTGGAAACCACCGAGGCTTTTGGCCTTGAAGCCGAGGATGTGAAGTATGTGACACAACATTTTAGGTACACATTTGTTAAGGAGAAGGTGAAGAGAAGTGCAAGGTATTACTCACCAGGGTGGAGAACTTGGGCTGCTGTGGCCATTCAATTGGCATGGAGGAGGTACAAGCATAGGTTGACTTTGACTTCATTGTCCTTTATAAGGCCTAGGAGGCCTTTGTCAAGGTCCTCTTCCATGGGAGAGGACAGGCTTCGCCTCTACACGGCTTTGTTAACCTCCCCAAAGCCTAATCAGGATGATTTTGACTTTTGA	2076	0.4798	MATTITEQEASSRAPHVLDYATTTSDDDTEKEEEELVHEQNESSGGGRWFPAACGGGTRRSGGGALGRVLDPRAKWVQEWNRVFLLVCAAGLFVDPLFFYALSVSDSCMCVFVDGWLAVTVTVLRCMTDALHVWNMVIRCKMAKRTFGLGASTTSSGRGTSSSSVGLRDTRPRSVAMGYLMSRTGFFFDLFVILPLPQIVLWVAIPSLLEKGSVTLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLKVQCEKTSGCGMKILSCQTPIYYGSNSFLVRDRARLAWAENREVRHTCLNGPDNYNYGAYRWSVQLVTNDNRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRRLPLGFRQRVRNYERQRWAAMRGVDEFEMTKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETIAREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLITLETTEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRSSSMGEDRLRLYTALLTSPKPNQDDFDF	691

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gma06g02499	691	Pfam	Ion transport protein	80	411	IPR005821	GO:0005216\|GO:0006811\|GO:0016020\|GO:0055085
Gma06g02499	691	PANTHER	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED	23	688	-	-
Gma06g02499	691	Gene3D	Jelly Rolls	492	610	IPR014710	-
Gma06g02499	691	MobiDBLite	consensus disorder prediction	1	46	-	-
Gma06g02499	691	Gene3D	Helix hairpin bin	419	485	-	-
Gma06g02499	691	Pfam	Cyclic nucleotide-binding domain	515	602	IPR000595	-
Gma06g02499	691	CDD	CAP_ED	494	600	IPR000595	-
Gma06g02499	691	PANTHER	CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN	23	688	-	-
Gma06g02499	691	SUPERFAMILY	Voltage-gated potassium channels	72	415	-	-
Gma06g02499	691	ProSiteProfiles	cAMP/cGMP binding motif profile.	494	604	IPR000595	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma06g02499	Gma-Chr6	47554915	47566505	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma06g02499	54	690	Ion Channels	AT5G54250	78.019	0.0	1025

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma06g02499	K05391		-	gmx:100796761	1343.95

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma12g01207	12	15617604	15630949	Gma06g02499	06	47554915	47566505	GST

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