Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02482 ATGCGCCTCATTCTCCAAATATTAACAAGCTCATCGCCCTCCTATCCATCATCGTGCTGGAGCTCTCCCAATTCGCCTCCACCATACCCCTTATCGTGGATCTCTCAGACCACTCCTCCCTCTCCATTCTCTTCGTCCCCAACACCTACCTCGCTGCCGACGACCACCACTTCTCCCCGACCACCTTCATCGACGCCAATCGCTACCACTTCCTCCTCCAATTCCTTTCTTGGTCCGACCTTTGCGCCTTCCCCCTTGGCAAGCTCATCACCACACTTCTTCAAATCACCGCCCGTGCTACCAACAATTTCAGGTTTCGGTTCTCTACCCTATCTTTCACGTATCGAAACCTTAAATTTACGATCAGGTCTGAGCAATCTGGTTGGTAGAACCTTTGGTCTTAGTGAGTCAAGTTTTATGTCTGAATTAGACGATCAAATTCCTACTGCCTTCGATCCTTTTGCTGATGCAAATGCTGATGACTCGGGTGCTGGGTCAAAGGAGTATGTGCATATTCGTGTACAGCAGCGAAATGGTAGGAAAAGCCTGACAACCGTTCAGGGATTGAAAAAGGAATTCAGCTATAACAAGATACTTAAAGACGTCAAGAAAGAGTTCTGTTGCAATGGAACAGTTGTTCAGGACCCAGAACTAGGACAGGTTATTCAACTTCAAGGTGATCAGAGGAAGAATGTTTCTACCTTCCTAGTCCAGGCTGGTATCGTGAAGAAGGATCATATCAAGATTCATGGTTTCTGA 759 0.4704 MRLILQILTSSSPSYPSSCWSSPNSPPPYPLSWISQTTPPSPFSSSPTPTSLPTTTTSPRPPSSTPIATTSSSNSFLGPTFAPSPLASSSPHFFKSPPVLPTISGFGSLPYLSRIETLNLRSGLSNLVGRTFGLSESSFMSELDDQIPTAFDPFADANADDSGAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDVKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKDHIKIHGF 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02482 252 ProSiteProfiles Translation initiation factor SUI1 family profile. 170 240 IPR001950 GO:0003743|GO:0006413
Gma06g02482 252 Gene3D - 132 252 - -
Gma06g02482 252 Pfam Translation initiation factor SUI1 167 241 IPR001950 GO:0003743|GO:0006413
Gma06g02482 252 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 146 252 IPR005874 GO:0003743
Gma06g02482 252 PANTHER BNAA03G48450D PROTEIN 140 252 - -
Gma06g02482 252 SUPERFAMILY eIF1-like 142 252 IPR036877 GO:0003743|GO:0006413
Gma06g02482 252 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 140 252 - -
Gma06g02482 252 MobiDBLite consensus disorder prediction 31 74 - -
Gma06g02482 252 CDD eIF1_SUI1 168 251 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02482 Gma-Chr6 47289632 47292505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02482 140 252 Eukaryotic Initiation Factors Gene Family AT4G27130 91.150 1.09e-76 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02482 K03113 - gmx:100499833 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02482 06 47289632 47292505 Gma06g02482 06 47289632 47292505 ECH