Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02475 ATGGCTTCTAACGCCATCATCCAATACGGCTCTTCTTCTTCTTCTTCATCTCATGCGATCATCACTGCATCTGATGTGTTTGTCAGCTTCCGCGGTGAAGACACGCTCAACAACTTCACTGTTTTTCTCTTTGATGCTCTCTCTCAAAATGGCATCGATGCCTTCAAAGATGATACACATCTTCAGAAAGGCGAATCCATAGCACCCGAGGTGCTACAGGCCATTGAAGAGTCTCTCCTTTTCCTTGTGGTCTTCTCTAAGAACTATGCTTCCTCAACTCGGTGCTTGCGTGAACTTGCACACATCTGCAACTGCACCGATGAAGCATCCCCGAGTCGTGTTCTTCCAGTTTTCTATGATGTTGATCCATCAGAGGTGCGGAAACAGAGTGGTTATTATGGGATTGCCTTTGCAGAACACGAACGAAGATTCAGAGAAGATATAGAGAAGATGGAGGAAGTGCTGAGATGGAGAGAAGCTCTGACACAAGTGGCCAATATCTCTGGCTGGGATATCCGAAATAAGTCACATCCTGCAATGATTAAAGAAATTGTTCAAAAAATAAAATATATATTGGGTCCCAAATTTCAAAATTTTCCAAATGGTAATCTGGTTGGGATGGAATCCCGTGTTGAAGAATTAGAAAAGTGTTTAGCACTGGAGTTGGTTGGTGACGTTCGAGTTGTCAGAATTAGTGGAATTGGTGGGATAGGAAAAACGACTCTTGCCCTTGCGTTTACAGGGGGTACAGATACTCTATTAAGTGAATGTCTTGGTGAAGGGAGCAGAATCGTTATAATTTGTAAGGATGAACAACTATTAAGGACACATGAAGTATATCATGTTTACCGAGTGCAACCGTTGAATCGACACATCGCTGTTCAGTTATTTTGCAAAAATGCTTTCAAATGTGACTATATTATGAGTGATTATGAAACATTGACACATGATGTACTATCACATGCTCAAGGCCATCCCTTGGCAATTGAAGTAATAAGCAAATCTTTGCATTGTCGAAATGTTTCGCAGTGGAGAGGTAGATTGGTTAGGCTAAGTGATAAGGTAAGTAAGCATACTTTGAAGGTGTTGGGAATAAGAAGCTTCTGCAATCCAGTTAGATGTTTGTTTCCTTCCTTTTCTATTTTCTCATGTATCCGTGAACTTGATCTAAGTTTCTGCAATTTACTTAAAATCCCTGATGCTTTTGGAAATTTGCATTGCTTAGAAAGGATAAGTTTAAGTGGAAACAATTTTGAAACACTACCCAGCCTCAAGGAGCTTTCCAAACTGTTAAGATTAGACTTACGACACTGCAAGAGATTGAAATATTTGCCTGAGCTCCCTTCACAAACTGATTGGCGGCCTTCGGATATTCGCCTGAGCTCCCTTCAAgatgatgaatcggatgatgaatcggatCACTTGCGGCTATTCTATTACACTCGATCACATTTTGATGTCTCTAATTTTGATGAGTTGAAAGTGGAAAGTAGATTCAGAGATCTTTATGATCAAGATTTGGATGTTGAGGTGAAGAAATGTGGGTATGATCGGGTATATGTACGGGATTTAGAACCATCACTCAACACAGGAATCGGGAAAAGAAAAAGGGGATTTGATTATGAAGACTTGATTAAAGATGTGCCATCATCATCTTCCTTCACCAATGATGTGTTCCTCAGCTTCAGAGGAGAAGATACTCGTTACAGTTTCACTGGCAATCTCTGCAGAGCCCTTCGTGACAGTGGAATTCACACCTTCGTTGATGACGATGAGCTCCAGAGAGGGGACGAAATAACGTCAGAACTTGAGAAGGAAATTGAAGACTCCAGATTTTTCATCATCGTTCTCTCTCAGAACTATGCATCTTCCTCATTTTGCTTAAACGTACTTGCTTACATTCTTGAGTGCGTTAAGAGAAAACGTTTGTTGGTTTTGCCAATTTTTTACAAGGTGGATCCTTCTAGTATTCGATTCCATGGAGGTAGTTTTGGAGAAGCATTGGCTAATCATGAAATGAAGTTCAAAGCTAAAATGGACGGGTTGGAGCATAACATGGAGAAACTGGAGAAATGGAAGATGGCTCTGCACGAAACAGCTAACTTCTCAGGCTATCATTTCAAACAAGGGGATGGATATGAATACGAGTTTATTACCAGGATAGTTGAATTGGTCTCTAGCAAGATTAAACAGTATCCTTTCCATGTTGGGGATTATCGAGTTGGACTAGAGTCATATTCAGAAGCATTCAACTATGATGTGTTCCTCAGCTTCAGAGGCTCAGACACACTCCATGGTTTTACTGGCTATCTCTACAAAGCTCTTCATGACAGAGGAATCCACACTTTCATTGATGAAGATCTTAAGAGAGGAGAAGAAATAACACCGGAAATTGTGAAGGCAATTGAAGAGTCCAGGATTGCTATCATTGTGCTCTCTATAAACTATGCTTCTTCCTCCTTTTGTTTAGACGAACTTGCAACCATCCTTGACTGCCTTGAGAGAAAAAGACTATTGGTTTTACCAGTCTTTTATAATGTGGATCATTATCAGGTGCTGGGAGGTAGTTATGTAGAAGCCTTGGTGAAACATGGGAAGAGTTTAAAGCATAGCATGGAGAAGTTGGAGAAATGGGAGATGGCTCTGTATGAAGTAGCTGACTTGTCCGACTTTAAAATCAAACATGGAGCTCGATATGAATACGACTTTATTGGGGAGATAGTTGAGTGGGTCTCCAGTAAGATTAATCCTGCTCATTACCCGGTTGGATTAGGGTCAAAAGTGCTGGAAGTAAGGAAACTTTTGGATGTTGGACGTGATGATGGTGTCCACATGTTAGGGATCCATGGAATTGATGGTGTAGGGAAATCAACACTTGCACGAGAAGTTTATAATAAACTGATTTCTGACCATTTTGATGCTTCCTGTTTTATTGAAAACGTGAGAGAAAAATCTAAAAAACATGGGTTACATCACCTCCAAAACATCCTTCTTTCGAAAATACTTGGAGAGAAGGACATCAACCTCACAAGTGCCCAACAAGAGATTTCAATGATGCAACGGCATAGGCTCCAGCAAAAGAAGGTTCTCATGGTTCTAGATGATGTTGACAGGCCTGAGCAATTGCAAGCAGTTACTGGAAAACCTGCTTGGTTTGGTCCTGGCAGCAAAGTCATAATCACAACACAAGACAAACAACTGCTAACATCTTATGACATTAATAGAACATATGAGGTGAAGAAATTGAATAAGGATGATGCTCTTCAATTACTTAAATGGAAAGCTTTTAAGATGCATTACTTCGATCCAAGGTATAAGATGCTCTTAAATCGTGCAGTAACTTTTGCTTCTAGTCTTCCATTGACTTTGGAAATATTAGCTTCCTACCTATTTGGAAAAAGTGTAAAAGAATGGAAATTTACTTTCCACCAATTTGTAAGAAGTCCGAATAATCCAATGGAAATGATACTTAAAGTAATCTTTGATTCTTTGAAGGAAAAAGAAAAGAGTGTTCTACTTGACATTGCTTGTTATTTCAAAGGATATGAATTGACAGAGGTTCAAGATATACTTCATGCTCATTATGGTCAGTGCATGAAGTATTATATTGACGTTTTGGTTGACAAATCTCTAGTATACATTACTCATGGTACAGAGCCTTGTAACGATACAATTACAATGCATGAATTGATTGCTAAAGAGATTGTCCGACTGGAATCAATGATGACAAAGCCAGGTGAGTGCAGGAGATTATGGTCATGGGAAGATGTAAGGGAAGTTTTTTTAGGATACAAGACGGCAACTAGCAAAATTGAAATTATATGTCTGGATTACCCCATATTTGATGAAGAAGAAATAGTACAATGGGATGGAACAACTTTCCAAAATATGCAAAACCTCAAAACACTTATTATTAGAAATGGTAATTTTTCCAAAGGTCCGGAATATCTTCCAAATAGTTTGAGAGTATTTGAATGGTGGGGATATCCGTCACATTGTTTACCATCTGATTTTCATCCAAAGGAACTTGCCATATGCAAGTTACCCTGCAGTCGTATTTCTACAACTGAGTTGACCAACTTATTGACGAAGTTCGTGAATGTGAAGCGTTTGAAATTTTCAAGCGAAAAGGTAAGCTTAAAATATTGA 4149 0.3902 MASNAIIQYGSSSSSSSHAIITASDVFVSFRGEDTLNNFTVFLFDALSQNGIDAFKDDTHLQKGESIAPEVLQAIEESLLFLVVFSKNYASSTRCLRELAHICNCTDEASPSRVLPVFYDVDPSEVRKQSGYYGIAFAEHERRFREDIEKMEEVLRWREALTQVANISGWDIRNKSHPAMIKEIVQKIKYILGPKFQNFPNGNLVGMESRVEELEKCLALELVGDVRVVRISGIGGIGKTTLALAFTGGTDTLLSECLGEGSRIVIICKDEQLLRTHEVYHVYRVQPLNRHIAVQLFCKNAFKCDYIMSDYETLTHDVLSHAQGHPLAIEVISKSLHCRNVSQWRGRLVRLSDKVSKHTLKVLGIRSFCNPVRCLFPSFSIFSCIRELDLSFCNLLKIPDAFGNLHCLERISLSGNNFETLPSLKELSKLLRLDLRHCKRLKYLPELPSQTDWRPSDIRLSSLQDDESDDESDHLRLFYYTRSHFDVSNFDELKVESRFRDLYDQDLDVEVKKCGYDRVYVRDLEPSLNTGIGKRKRGFDYEDLIKDVPSSSSFTNDVFLSFRGEDTRYSFTGNLCRALRDSGIHTFVDDDELQRGDEITSELEKEIEDSRFFIIVLSQNYASSSFCLNVLAYILECVKRKRLLVLPIFYKVDPSSIRFHGGSFGEALANHEMKFKAKMDGLEHNMEKLEKWKMALHETANFSGYHFKQGDGYEYEFITRIVELVSSKIKQYPFHVGDYRVGLESYSEAFNYDVFLSFRGSDTLHGFTGYLYKALHDRGIHTFIDEDLKRGEEITPEIVKAIEESRIAIIVLSINYASSSFCLDELATILDCLERKRLLVLPVFYNVDHYQVLGGSYVEALVKHGKSLKHSMEKLEKWEMALYEVADLSDFKIKHGARYEYDFIGEIVEWVSSKINPAHYPVGLGSKVLEVRKLLDVGRDDGVHMLGIHGIDGVGKSTLAREVYNKLISDHFDASCFIENVREKSKKHGLHHLQNILLSKILGEKDINLTSAQQEISMMQRHRLQQKKVLMVLDDVDRPEQLQAVTGKPAWFGPGSKVIITTQDKQLLTSYDINRTYEVKKLNKDDALQLLKWKAFKMHYFDPRYKMLLNRAVTFASSLPLTLEILASYLFGKSVKEWKFTFHQFVRSPNNPMEMILKVIFDSLKEKEKSVLLDIACYFKGYELTEVQDILHAHYGQCMKYYIDVLVDKSLVYITHGTEPCNDTITMHELIAKEIVRLESMMTKPGECRRLWSWEDVREVFLGYKTATSKIEIICLDYPIFDEEEIVQWDGTTFQNMQNLKTLIIRNGNFSKGPEYLPNSLRVFEWWGYPSHCLPSDFHPKELAICKLPCSRISTTELTNLLTKFVNVKRLKFSSEKVSLKY 1382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02475 1382 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 363 IPR027417 -
Gma06g02475 1382 Pfam TIR domain 25 190 IPR000157 GO:0007165
Gma06g02475 1382 Pfam TIR domain 751 915 IPR000157 GO:0007165
Gma06g02475 1382 Pfam TIR domain 557 731 IPR000157 GO:0007165
Gma06g02475 1382 Gene3D - 550 736 IPR035897 -
Gma06g02475 1382 ProSiteProfiles TIR domain profile. 22 192 IPR000157 GO:0007165
Gma06g02475 1382 Gene3D - 22 196 IPR035897 -
Gma06g02475 1382 SUPERFAMILY "Winged helix" DNA-binding domain 1154 1260 IPR036390 -
Gma06g02475 1382 SMART till_3 23 167 IPR000157 GO:0007165
Gma06g02475 1382 SMART till_3 555 702 IPR000157 GO:0007165
Gma06g02475 1382 SMART till_3 751 888 IPR000157 GO:0007165
Gma06g02475 1382 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 315 453 - -
Gma06g02475 1382 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 558 745 - -
Gma06g02475 1382 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 26 245 - -
Gma06g02475 1382 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 755 1371 - -
Gma06g02475 1382 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 257 344 - -
Gma06g02475 1382 Gene3D - 197 251 IPR027417 -
Gma06g02475 1382 PRINTS Disease resistance protein signature 945 960 - -
Gma06g02475 1382 PRINTS Disease resistance protein signature 1023 1037 - -
Gma06g02475 1382 PRINTS Disease resistance protein signature 1116 1130 - -
Gma06g02475 1382 PRINTS Disease resistance protein signature 1295 1311 - -
Gma06g02475 1382 Gene3D - 913 1075 IPR027417 -
Gma06g02475 1382 SUPERFAMILY Toll/Interleukin receptor TIR domain 24 170 IPR035897 -
Gma06g02475 1382 Gene3D - 749 912 IPR035897 -
Gma06g02475 1382 ProSiteProfiles Leucine-rich repeat profile. 407 428 IPR001611 GO:0005515
Gma06g02475 1382 SUPERFAMILY L domain-like 329 1375 - -
Gma06g02475 1382 ProSiteProfiles TIR domain profile. 554 729 IPR000157 GO:0007165
Gma06g02475 1382 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 245 IPR044974 GO:0006952
Gma06g02475 1382 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 315 453 IPR044974 GO:0006952
Gma06g02475 1382 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 755 1371 IPR044974 GO:0006952
Gma06g02475 1382 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 257 344 IPR044974 GO:0006952
Gma06g02475 1382 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 558 745 IPR044974 GO:0006952
Gma06g02475 1382 SUPERFAMILY Toll/Interleukin receptor TIR domain 550 705 IPR035897 -
Gma06g02475 1382 Gene3D Ribonuclease Inhibitor 369 495 IPR032675 -
Gma06g02475 1382 Gene3D - 288 366 IPR042197 -
Gma06g02475 1382 Gene3D - 1081 1165 IPR042197 -
Gma06g02475 1382 Pfam NB-ARC domain 931 1156 IPR002182 GO:0043531
Gma06g02475 1382 ProSiteProfiles TIR domain profile. 750 915 IPR000157 GO:0007165
Gma06g02475 1382 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 918 1175 IPR027417 -
Gma06g02475 1382 SUPERFAMILY Toll/Interleukin receptor TIR domain 746 890 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02475 Gma-Chr6 47177451 47183872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02475 25 243 WRKY Transcription Factor Family AT4G12020 26.697 3.44e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02475 - - gmx:100785853 2731.82