Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02474 ATGAAGTTTGATTCTATATTCCAACAGACCAACCTACATTCCGGCATAATAATACTAAACTTTTTTCTTCTAATGGCTGAAACATGTTCCGGTGCATCCAGATACGATGTGTTCATTAACTTCAGAGGGGAAGACACACGTTATGAATTTACTGGGCATCTCCACCAAGCTCTTTGTAAGAAGGGAATCCGTGCTTTCTTTGATGAAGAGGACCTTCAGACAGGAGACGAAATAACAACAAAACTTGAGGAGGCAATTAAAGGGTCGAGGATTGCCATCACTGTGTTCTCTAAAGGTTATGCTTCTTCCTCATTTTGCTTAAATGAACTTGCAACCATCCTTGGCTGCTACCGCGAGAAAACTCCACTGTTGGTTATTCCTGTCTTTTATAAGGTGGATCCTTCTGATGTAAGACACCAGCGAGGAAGTTATGAACAAGGATTGGATAGTCTTGAGAAAAGGTTACATCCTAACATGGAGAAATGGAGGACGGCTCTGCACGAAGTAGCAGGATTTTCTGGGCATCATTTCACAGATGGAGCTGGATATGAATACCAGTTTATTGAGAAGATTGTTGATGATGTCTTCCGCAAGATTAATGAAGCTGAAGCAAGTATATATGTTGCGGATCACCCGGTTGGATTAGACTCACTAGTGCTAGAAATAAGGGAACGTTTGGAGGCTGAATCTAGTGATGCTATCTCCATGATAGGGATCCACGGAATGGGCGGGGTAGGAAAATCAACACTTGCTCGACAAGTTTATAATTTGCATACTAATCAATTTGATTATTCGTGTTTCCTACAAAACGTGAGAGAAGAATCAAACAGACACGGGTTAAAACGCCTACAAAGCATCCTTCTTTCACAAATACTTAAGCAGGGCATCAACTTAGCAAGTGAGCAACAAGGAACTTGGATGATAAAAAATCAGCTCAGAGGAAAGAAGGTTCTCTTAGTTCTAGATGATGTTGATGAGCACAAGCAATTACAGGCATTTGTTGGAAAATCTGTTTGGCCTGAGTCTCAGTCTGAGTCTAAGTCTGGCACCAGATTGGTTCTGATCATCACCACTCGGGACAAACAACTCCTAACATCTTATGGGTTCAAAAGAACATATGAGGTGAAAAATTTGAGTACAAACGATGCTATTCAATTGCTTAAACAGAAAGCTTTTAAAACATGTGATGAAGTTGATCAAAGTTACAAGCAGGTCTTGAATGATGTAGTAACTTGGACTTCTGGCCTTCCATTGGCTTTGGAAGTGATAGGTTCAAACCTGTTTGGAAAAAGTATTAAAGAATGGGAATCAGCTATCAAACAATATCAAAGAATTCCCAATAAGGAAATCTTGAAGATACTTAAAGTAAGCTTTGATGCTTTGGAGGAAGAAGAAAAAAGTGTTTTTCTTGACATTACTTGTTGCTTGAAAGACTATAAATGCAGAGAGATTGAAGATATACTTCACAGTCTCTATGATAACTGCATGAAATACCATATTGGGGTGCTTCTTGACAAGTCTCTCATTAAGATTAGAGATGATAAAGTTACATTGCATGACTTGATTGAGAACATGGGTAAAGAGATTGACAGGCAGAAATCACCGAAAGAGGCAGGCAAGCGGAGGAGATTATGGTTACAGAAAGATATAATTCAAGTTTTAAAAGACAACTTGGGGACCAGTGAAGTTAAAATCATTTGTCTGGATTTCCCCATATCTGACAAACAAAAAACAATAGAATGGGATGGAAATGCCTTAAAGGAGATGAAAAACCTTAAAGCACTTATTATCAGAAACGCTTGCCATACGCGACTTGGAATAGTTCCATCCCGTCATTGGGGTGTGGTGGCATATCGAAGAAGTTGA 1866 0.3928 MKFDSIFQQTNLHSGIIILNFFLLMAETCSGASRYDVFINFRGEDTRYEFTGHLHQALCKKGIRAFFDEEDLQTGDEITTKLEEAIKGSRIAITVFSKGYASSSFCLNELATILGCYREKTPLLVIPVFYKVDPSDVRHQRGSYEQGLDSLEKRLHPNMEKWRTALHEVAGFSGHHFTDGAGYEYQFIEKIVDDVFRKINEAEASIYVADHPVGLDSLVLEIRERLEAESSDAISMIGIHGMGGVGKSTLARQVYNLHTNQFDYSCFLQNVREESNRHGLKRLQSILLSQILKQGINLASEQQGTWMIKNQLRGKKVLLVLDDVDEHKQLQAFVGKSVWPESQSESKSGTRLVLIITTRDKQLLTSYGFKRTYEVKNLSTNDAIQLLKQKAFKTCDEVDQSYKQVLNDVVTWTSGLPLALEVIGSNLFGKSIKEWESAIKQYQRIPNKEILKILKVSFDALEEEEKSVFLDITCCLKDYKCREIEDILHSLYDNCMKYHIGVLLDKSLIKIRDDKVTLHDLIENMGKEIDRQKSPKEAGKRRRLWLQKDIIQVLKDNLGTSEVKIICLDFPISDKQKTIEWDGNALKEMKNLKALIIRNACHTRLGIVPSRHWGVVAYRRS 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02474 621 Pfam TIR domain 35 206 IPR000157 GO:0007165
Gma06g02474 621 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 37 600 IPR044974 GO:0006952
Gma06g02474 621 Pfam NB-ARC domain 219 454 IPR002182 GO:0043531
Gma06g02474 621 Gene3D - 203 370 IPR027417 -
Gma06g02474 621 SUPERFAMILY "Winged helix" DNA-binding domain 448 555 IPR036390 -
Gma06g02474 621 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 37 600 - -
Gma06g02474 621 Gene3D - 29 202 IPR035897 -
Gma06g02474 621 SUPERFAMILY Toll/Interleukin receptor TIR domain 27 174 IPR035897 -
Gma06g02474 621 PRINTS Disease resistance protein signature 236 251 - -
Gma06g02474 621 PRINTS Disease resistance protein signature 587 603 - -
Gma06g02474 621 PRINTS Disease resistance protein signature 311 325 - -
Gma06g02474 621 PRINTS Disease resistance protein signature 413 427 - -
Gma06g02474 621 ProSiteProfiles TIR domain profile. 33 199 IPR000157 GO:0007165
Gma06g02474 621 SMART till_3 34 172 IPR000157 GO:0007165
Gma06g02474 621 Gene3D - 377 462 IPR042197 -
Gma06g02474 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 472 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02474 Gma-Chr6 47173650 47175967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02474 30 595 WRKY Transcription Factor Family AT4G12020 27.257 3.24e-44 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02474 - - gmx:100790804 1186.02