Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02471 ATGGAAATCAAAACTAAAGTAGAAAACAGAATTTTCAATCGGGTTTTGGTGGAGAAAATTGTGCCTCCATCAAAGACCAACGCTGGCATTTTGTTACCCGAGAAATCCTCCAAGCTAAATTCCGAAAAAGTTATTGCTGTTGGCCCTGGCTTTCACAGTAAGAATGGGAAGCTAATTCCTGTGGCTGTTAAGGAAGGTGATACTGTTCTTTTGCCTGAATATGGGGGAACTGAGGTGAAGCTTGATAACAAAGAATACTGGAAGGACTTCTTGAACTACTAG 282 0.4078 MEIKTKVENRIFNRVLVEKIVPPSKTNAGILLPEKSSKLNSEKVIAVGPGFHSKNGKLIPVAVKEGDTVLLPEYGGTEVKLDNKEYWKDFLNY 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02471 93 SUPERFAMILY GroES-like 11 87 IPR011032 -
Gma06g02471 93 PANTHER 10 KDA HEAT SHOCK PROTEIN 11 87 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma06g02471 93 CDD cpn10 11 86 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma06g02471 93 Pfam Chaperonin 10 Kd subunit 12 86 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma06g02471 93 Gene3D GroES chaperonin 9 88 IPR037124 GO:0006457
Gma06g02471 93 SMART Cpn10_2 11 86 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma06g02471 93 PRINTS 10kDa chaperonin signature 8 23 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma06g02471 93 PRINTS 10kDa chaperonin signature 64 76 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma06g02471 93 PRINTS 10kDa chaperonin signature 29 50 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma06g02471 93 PANTHER GROES-LIKE FAMILY PROTEIN 11 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02471 Gma-Chr6 47125880 47130697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02471 13 93 Calmodulin-binding Proteins AT5G20720 37.805 3.44e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02471 K04078 - gmx:106798298 160.229