Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02456 ATGTTGAGGATTCAAAATTTTGAGGGTGATGTGCTCTTCCTAGACAACAAAGAGCAAAGAGTTGGAGCAGAAACAATGGTGGGGACTCCAATTAATGGAAGAACCAGGCAAGCTTTCACAGTTGTCAATGGCGGTGGCCACGATCTTTGCCCCAGTAGTACTCCTCCAAGCAATGCTGGATCGGACTATGGTGTCATAGAGTTCACCAGAGAGGATGTGGAGGCATTGCTAAATGAAAAAGCCAAGAGAAAGGACAGATTTAATTATAAGGAACGATGTGAAAATATGATGGATTATATAAAAAGGCTTAAGGTTTGTATCAGATGGTTCCAAGACCTTGAGATGTACTACTCTCTAGAGCAGGAGAAGTTAAAGAATTCACTGGAAATGACCCAGAAAAAATGCATAGAAATTGAGTTGCTGCTTAAAATCAAGGAAGAAGAATTAAATTCAATTATCACAGAAATGAGAAGGAATTGCACTTCCTTACAAGAAAAATTGATCAAGGAAGAAATGGAAAAGTCGGCTGCAGTGGAGTCTCTTGTTAAAGAGAGAGAAGCTAGGCTTGACATTGAGAGGTCACATAGTACTCTGTCAGAGGACCTTGGAAGAGCACAACGAGAGATGCAAAGTGCAAATCAGAAGATAGCATCACTCAATGAAATGTATAAGCGGTTACAGGATTACATTACAAGCTTACAACAGTACAATGGAAAACTTCACTCTGAGCTTTCGTCGGTTGAGGATGAACTTAAACGCGTAGAAAAGGAGAAGGTTTCGGTAGTGGAGAACATCACCTTGTTAAGGGGTCAACTTACTGTATCCGTTtcttctcaagaggaggccataaaacagaaggatgtcttggctacagaagtttcctctcttagaggagagttgcaacaagtaagagatgagcgagaccggcaattatctcaagtacaaattttaagttctgaattagagaaagttaaagaatctacaaaacattcctccactgaattggacagcttgacgtttaaagctaatgatctggaggaaaaatgttctctgaaagataatcaaataaaggcattggaagagcagctagcaactgcagagaagaaactgcaggtgtctgatatatctgcatatgagacaaggacagaatatgagggacaacagatatttgtgaatgagttacaaagacgcttagcagatgcagaatataaacttatagaaggggagaggctgcggaaaaaattacataataccattttggaattaaaagggaacattcgtgtattttgtcgtgtgaggcctttattagctgatgaaagttgtagcacagaaggcaggattttcagttatccaacatcaatggaaacttctggacgagccattgacctagcccaaaatggccaaaaacatgcttttacatttgataaagtttttacaccagaggcatcacaagaagaagtttttgtggaaatttcacagcttgtgcaaagtgctcttgatggttacaaggtttgcatctttgcctatggtcagacagggtcagggaagacctatacaatgatgggaaggcctggacatccagaggagaagggcttgatacctcgttcattagaacaaatatttcaaactaagcagtctcagcaacctcagggctggaaatatgaaatgcaggtgtcaatgttggaaatatacaacgaaacgatccgtgatctgatatctacaacaacacgtgtggaaaatggtactcctggaaaacaatatacaatcaaacatgacgtaaatggaaatacacaagtttctgatctcacagtagtggatgttcatagtgctaaagaggttgcatttcttttaaatcaagctgcaaatagcagATCTGTGGGAAAAACCCAGATGAATGAACAATCATCAAGAAGTCATTTTGTATTCACTCTTCGAATATACGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGTGTTCTGAACCTTATTGATCTTGCTGGTAGCGAGCGGCTTTCAAAGAGTGGATCAACTGGGGACCGGTTGAAAGAAACTCAAGCAATCAACAAAAGTTTATCATCACTGAGTGATGTTATATTTGCCTTAGCCAAGAAGGAGGACCATGTGCCATTCAGAAACTCAAAGCTTACATATCTGCTTCAGCCTTGTCTAGGTGGAGACTCCAAGACACTAATGTTTGTGAACATATCACCTGATCCTTCTTCAGTTGGTGAGTCACTATGCTCACTCAGGTTTGCATCAAGAGTCAATGCTTGTGAGATTGGAACACCTCGGCGTCAAACCAATGGACGTTCAATAGAGTCTCGCTTGAGCTATTTCTAA 2343 0.2283 MLRIQNFEGDVLFLDNKEQRVGAETMVGTPINGRTRQAFTVVNGGGHDLCPSSTPPSNAGSDYGVIEFTREDVEALLNEKAKRKDRFNYKERCENMMDYIKRLKVCIRWFQDLEMYYSLEQEKLKNSLEMTQKKCIEIELLLKIKEEELNSIITEMRRNCTSLQEKLIKEEMEKSAAVESLVKEREARLDIERSHSTLSEDLGRAQREMQSANQKIASLNEMYKRLQDYITSLQQYNGKLHSELSSVEDELKRVEKEKVSVVENITLLRGQLTVSVSSQEEAIKQKDVLATEVSSLRGELQQVRDERDRQLSQVQILSSELEKVKESTKHSSTELDSLTFKANDLEEKCSLKDNQIKALEEQLATAEKKLQVSDISAYETRTEYEGQQIFVNELQRRLADAEYKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLADESCSTEGRIFSYPTSMETSGRAIDLAQNGQKHAFTFDKVFTPEASQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETIRDLISTTTRVENGTPGKQYTIKHDVNGNTQVSDLTVVDVHSAKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSVGESLCSLRFASRVNACEIGTPRRQTNGRSIESRLSYF 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02456 780 Coils Coil 391 411 - -
Gma06g02456 780 PANTHER KINESIN-LIKE PROTEIN KLP-3 25 779 - -
Gma06g02456 780 Coils Coil 237 264 - -
Gma06g02456 780 Gene3D Kinesin motor domain 373 761 IPR036961 -
Gma06g02456 780 Coils Coil 146 173 - -
Gma06g02456 780 PRINTS Kinesin heavy chain signature 501 522 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma06g02456 780 PRINTS Kinesin heavy chain signature 629 646 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma06g02456 780 PRINTS Kinesin heavy chain signature 660 678 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma06g02456 780 PRINTS Kinesin heavy chain signature 709 730 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma06g02456 780 SMART kinesin_4 423 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma06g02456 780 PANTHER KINESIN-LIKE PROTEIN 25 779 - -
Gma06g02456 780 ProSitePatterns Kinesin motor domain signature. 659 670 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma06g02456 780 ProSiteProfiles Kinesin motor domain profile. 425 759 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma06g02456 780 SUPERFAMILY Bacterial hemolysins 109 361 - -
Gma06g02456 780 CDD KISc_C_terminal 423 761 - -
Gma06g02456 780 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 383 757 IPR027417 -
Gma06g02456 780 Coils Coil 66 86 - -
Gma06g02456 780 Coils Coil 286 320 - -
Gma06g02456 780 Coils Coil 342 376 - -
Gma06g02456 780 Coils Coil 195 229 - -
Gma06g02456 780 Pfam Kinesin motor domain 431 757 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02456 Gma-Chr6 46907595 46913553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02456 397 773 Calmodulin-binding Proteins AT5G65930 38.992 6.63e-78 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02456 K10405 - gmx:100788335 1491.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02456 06 46907595 46913553 Gma06g02456 06 46907595 46913553 ECH
Gma12g01232 12 16240503 16246248 Gma06g02456 06 46907595 46913553 GST
Gma13g02530 13 40191183 40197386 Gma06g02456 06 46907595 46913553 PCT
Gma12g02027 12 40907754 40913546 Gma06g02456 06 46907595 46913553 PCT
Gma06g02456 06 46907595 46913553 Gma13g02530 13 40191183 40197386 PCT
Gma06g02456 06 46907595 46913553 Gma12g02027 12 40907754 40913546 PCT