Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02454 ATGGGAATTCAAAAACATATGGTTAACATAAAGGTTACTTTTGGGGTTCTTTCGGTTCTTCTTCTTGTGGCAGCAGTCAGTTCTATAGAAAAGAAGGAAGCAGAGAATGATTTTGTTAGGGAGTTACTTGATCCAGCATCTGGATTGTTAGATGAGCACACGGAATTGTCTGGCAGCACCAATATAATCAGTTCAGAGATTCAACCAATAGAACAGGAAGAAATACAAAAATTTATCAGTTCTTACTGTCCACAATTCCTGGGGAACTTTCTTCACTGTTTGAGAAAAAATAATCATCCATTACCTGTCTCAGGAAAAGAAGATGATTCCAAGATTTGGCATGTCACTTATATGGGACCACTTTTTTCCCGTTCCAGTGATCCTGAAAGAAAATTTGGTCGTATTTTGCTCCAACACATATCAGAACCACCTAGTCCAGGTCCTGCAGTTGGATCACCTACACAcagtttagcgccatctcctgaatccagtctagcaccatcatctgaacccagtctggccccatcatctgaacccagtctggccccatcaCCTTTTGCTCCAGCACCTCTAGTTCATAAACCTTCGCATCCTTTACCACCAACATCATTTTTCCCAAAATTGACTCCACCAGAAGAAGCTTCAGAAATTTCTTCTCCATCTTCTGACATTAACAAACTGGAAGAGAGGCATAGTAATAAAAAAACAGTTGTTCTTGCTGTAGTTATAACTGCATTGGTGACATTTATAGCTGCAGCATTGCTCTTTTTATGCTGTACTCGGCATCGTAAGACTGGCCATTTCAGACTCAATGATGATAGGCCTCTTCTTAGCTTGAGCATGAGTGACTACTCTGTTGGTCCTTCCAGTTATTCGTTCGGAAATTCAATAAAAGGGGAGAAAGTTGAGTTTCAGTCATCAAGTAATGGTTTGGTGGACAATAAGAAGTATTCAGTGCAGGAAAGCCAATCAATAGGAGCTCTTAATGCTGCTGCTGGATCACCATTTGAACTGAAACCTCCTCCCGGGAGGGTGGGAGCCACAATCCTTTCTGGACTGCCTCCTTTAAAACCTCCTCCAGGCAGGCTAAACCCTCTTCCTCCTGAGCCACCTTCATTTAGACCTTCTGGTGATGCAGCTCCAGCTGCTGTTGCTGCTGTTGCTACAGCTCCTCCTCCTGCCCCTCAACAGCCTGGTTTGAGTAGCACTCTaccaccccgaccaccagctggtgccagacctggcccacctctaccactaccgccagcactagctggtgcgagacctggtcctcctccaccacctccagcatcagttggtgtgaaacctggtcctcctccaccaccacccacagcaccagctggtgccaaacctggtcctcctcctccaccacccccagctggtgccaaacctggtcctcgtccaccaccacctccTATGAGTGGTGTGGCTCCTCCTCGACCTCCACCCTCGTTTGGCTCAAAGGTGCCGCGGCCGTTAGCTAGTGGATCAAAAGATACAGTTGTAGCTGGAGTAGAAGGTGAAGCTGATGCTCCCAAAGCCAAGCTAAAGCCCTTCTTCTGGGATAAGGTTCAAGCTAACCCGGATCAGTCAATGGTTTGGAATCAAATCAAATCAGGATCTTTCCAGTTTAATGAAGAGATGATAGAGACGCTTTTTGGCTATAATGCTGTGGATAAGAACAATGGTAAAAAACAGAAACAGTCTTCCTCCCAAGACCCTTCACCACTGTTTATCCAGATCATTGACAAAAAGAAAGCACAGAATTTATTGATTCTGTTGCGTGCATTGAATGTGACAATGGAAGAAGTTTGTGATGCACTTTATGAAGGACATGAGCTGCCCCCGGAATTCCTTCAAACCTTGCTGAAGATGGCACCAACATCGGATGAAGAACTTAAGCTTAGACTTTTTAGTGGTGATCTATCTCAACTTGGGCCTGCTGATCGTTTCCTGAAAGCCATGGTTGACATTCCATTTGCATTTAAGCGAATGGAAGTTCTCCTTTTCATGGGCTCACTTAAAGAGGATCTTGCAACTACTATGGAATCTTTTGCCATTTTAGAGGTTGCTTGTAAGGAACTAAGAAACAACCGGCTGTTCCTCAAGCTTCTTGAAGCCGTTCTCAAAACTGGCAACCGAATGAATGATGGAACTTTCCGTGGTGGTGCACAAGCATTTAAACTTGATACACTTCTGAAATTATCTGATGTAAAAGGAACAGATGGCAAGACTACACTCTTACATTTTGTTGTTCTAGAGATTATCCGCTCCGAGGGCATAAAAGCCATCAGAAAGGCAAAAGAGAGCCAGAAATCGTCTAGTATTAAATTGGATGACCTTCACGATAGTACCCGAGAAACAGAAGATCGCTACCATGAAATCGGTCTTCAGGTGGTTTCACGATTGAGCAGTGAACTTGAGAATGTAAAAAAAGCAGCAATTATAGATGCTGACAGCTTAACAGGAACTACTGCCAAACTTGGCCATGGTCTCATAAAAACACGAGACTTGGTAAACAAAAGCATGAAGAATGTGGAGGAAGATAGGGGGTTTTGTGAGACAGTGAAAAGTTTTGTGCAGAATGCTGAGGCTGATGTTATGAAACTGCTGGAAGAGGAGAAGAAAATCGTGGCTTTGGTGAAGAGCACTGGTGATTACTTCCATGGGAATTCTGGGAAGGATGAAGGCACCAGGTTGTTCATAGTAGTACGAGACTTCCTAATAATGGTGGATAAAGTATGCAACGAGGTGAGAGATACAAAGAAGAAGTCGGTTAAAACTCAAAAACAAGAGACTCCTCGAGAAGCATCTTCATCTGAACCACGTCCACCACCTGATTTTCGTCAGCGACTTTTTCCAGCGATTGCTGAAAGGAGGATGGATGACATTAGTTCAGACGATGAGAGTCCATAG 2937 0.3817 MGIQKHMVNIKVTFGVLSVLLLVAAVSSIEKKEAENDFVRELLDPASGLLDEHTELSGSTNIISSEIQPIEQEEIQKFISSYCPQFLGNFLHCLRKNNHPLPVSGKEDDSKIWHVTYMGPLFSRSSDPERKFGRILLQHISEPPSPGPAVGSPTHSLAPSPESSLAPSSEPSLAPSSEPSLAPSPFAPAPLVHKPSHPLPPTSFFPKLTPPEEASEISSPSSDINKLEERHSNKKTVVLAVVITALVTFIAAALLFLCCTRHRKTGHFRLNDDRPLLSLSMSDYSVGPSSYSFGNSIKGEKVEFQSSSNGLVDNKKYSVQESQSIGALNAAAGSPFELKPPPGRVGATILSGLPPLKPPPGRLNPLPPEPPSFRPSGDAAPAAVAAVATAPPPAPQQPGLSSTLPPRPPAGARPGPPLPLPPALAGARPGPPPPPPASVGVKPGPPPPPPTAPAGAKPGPPPPPPPAGAKPGPRPPPPPMSGVAPPRPPPSFGSKVPRPLASGSKDTVVAGVEGEADAPKAKLKPFFWDKVQANPDQSMVWNQIKSGSFQFNEEMIETLFGYNAVDKNNGKKQKQSSSQDPSPLFIQIIDKKKAQNLLILLRALNVTMEEVCDALYEGHELPPEFLQTLLKMAPTSDEELKLRLFSGDLSQLGPADRFLKAMVDIPFAFKRMEVLLFMGSLKEDLATTMESFAILEVACKELRNNRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGIKAIRKAKESQKSSSIKLDDLHDSTRETEDRYHEIGLQVVSRLSSELENVKKAAIIDADSLTGTTAKLGHGLIKTRDLVNKSMKNVEEDRGFCETVKSFVQNAEADVMKLLEEEKKIVALVKSTGDYFHGNSGKDEGTRLFIVVRDFLIMVDKVCNEVRDTKKKSVKTQKQETPREASSSEPRPPPDFRQRLFPAIAERRMDDISSDDESP 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02454 978 MobiDBLite consensus disorder prediction 960 978 - -
Gma06g02454 978 MobiDBLite consensus disorder prediction 181 207 - -
Gma06g02454 978 MobiDBLite consensus disorder prediction 139 226 - -
Gma06g02454 978 MobiDBLite consensus disorder prediction 927 944 - -
Gma06g02454 978 Gene3D Formin, FH2 domain 518 950 IPR042201 -
Gma06g02454 978 ProSiteProfiles Formin homology-2 (FH2) domain profile. 513 944 IPR015425 -
Gma06g02454 978 MobiDBLite consensus disorder prediction 927 978 - -
Gma06g02454 978 SMART it6_source 513 933 IPR015425 -
Gma06g02454 978 MobiDBLite consensus disorder prediction 353 375 - -
Gma06g02454 978 MobiDBLite consensus disorder prediction 391 495 - -
Gma06g02454 978 Pfam Formin Homology 2 Domain 515 918 IPR015425 -
Gma06g02454 978 PANTHER FORMIN-RELATED 1 976 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma06g02454 978 PANTHER FORMIN-LIKE PROTEIN 1 976 - -
Gma06g02454 978 MobiDBLite consensus disorder prediction 338 503 - -
Gma06g02454 978 MobiDBLite consensus disorder prediction 156 179 - -
Gma06g02454 978 SUPERFAMILY Formin homology 2 domain (FH2 domain) 461 935 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02454 Gma-Chr6 46843956 46851031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02454 475 969 FH2 protein (formin) Gene Family AT5G54650 64.400 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02454 - - gmx:100776210 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02454 06 46843956 46851031 Gma06g02454 06 46843956 46851031 ECH
Gma12g01234 12 16432811 16440147 Gma06g02454 06 46843956 46851031 GST
Gma13g02528 13 40174931 40179341 Gma06g02454 06 46843956 46851031 PCT
Gma12g02029 12 40926338 40930840 Gma06g02454 06 46843956 46851031 PCT
Gma06g02454 06 46843956 46851031 Gma13g02528 13 40174931 40179341 PCT
Gma06g02454 06 46843956 46851031 Gma12g02029 12 40926338 40930840 PCT