Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02451 ATGAAAGAGGAGTCAGTTGGACTAATTATTGGGGTTTCCATAGGTGTGGTTATTGGACTAGTTTTGGCAATTTTTGCATTCTTCTGCCACCGATACCATCGGAAGCGATCACAGATAGGCAATAGCAGTTCTAGAAGGGCTGCTACCATACCTATTCGCACAAATGGTGCTGATTCGTGCACCATTCTTTCAGACTCAACCTTAGGTCCAGAATCACCCATAAAGTCAGATAGACATGGCATGCCCTTTTGGCTTGATGGGTTTAAGAAGAGTAGTAGTAGCATGATCCCAGCATCTGGACTACCTGAATATGCATACAAGGATTTGCAGaaggcaacacataacttcaccacagtcattggagaaggcgcatttggtcctgtttataaagctcagatgtctaccggtgagactgttgcagttaaaGTTCTTGCAACTAATTCTAAGCAAGGGGAGAAAGAATTTAACACAGAGGTCATGTTGTTGGGAAGGTTACACCATAGAAATCTGGTGAATTTGGTTGGATATTGTGCAGAAAAGGGGAAACATATGCTTGTATATGTATACATGAGTAACGGTAGCTTGGCATCCCACTTGTATAGTGATGTGAATGAAGCACTGTCCTGGGATTTGAGGGTTCCCATAGCTTTAGATGTGGCAAGAGGCTTGGAATATCTTCATAATGGGGCAGTTCCTCCTGTAATCCATCGAGATATCAAATCTTCCAATATTCTGTTGGATCAATCCATGAGAGCCAGGGTTGCTGATTTTGGACTTTCAAGAGAAGAGATGGTGGATAAACATGCAGCTATTCGGGGTACCTTTGGCTATCTTGACCCCGAGTATATATCTTCCGGAACATTCACTAAGAAAAGTGATGTATACAGTTTTGGGGTGTTGCTCTTTGAAATTATAGCTGGCAGGAATCCTCAGCAGGGTCTTATGGAATACGTTGAGCTTGCAGCAATGAACACTGAGGGAAAAGTTGGGTGGGAGGAAATCGTGGATTCTCGCCTTCAAGGAAACTTTGATGTCAAGGAACTCAATGAAATGGCAGCACTTGCCTACAAATGCATCAACCGTGCCCCAAGTAAACGTCCTTCTATGAGGGACATAGTGCAAGTGTTAACAAGGATACTTAAATCAAGGAACCATGGGAGTCATCACAAAAATTCCTTGTCAGCCACAGATGAAGTTTTCATTGACACTGATCAGCTAGAGAACAAGATTTCTGTTACTGACCACAGGAGAGAAGAGTCTTTGGATAGTGTAGCAGAGGTGTATGAAGTGTAG 1293 0.3968 MKEESVGLIIGVSIGVVIGLVLAIFAFFCHRYHRKRSQIGNSSSRRAATIPIRTNGADSCTILSDSTLGPESPIKSDRHGMPFWLDGFKKSSSSMIPASGLPEYAYKDLQKATHNFTTVIGEGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFNTEVMLLGRLHHRNLVNLVGYCAEKGKHMLVYVYMSNGSLASHLYSDVNEALSWDLRVPIALDVARGLEYLHNGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFEIIAGRNPQQGLMEYVELAAMNTEGKVGWEEIVDSRLQGNFDVKELNEMAALAYKCINRAPSKRPSMRDIVQVLTRILKSRNHGSHHKNSLSATDEVFIDTDQLENKISVTDHRREESLDSVAEVYEV 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02451 430 PANTHER OS01G0253100 PROTEIN 5 404 IPR045271 GO:0004714|GO:0006468
Gma06g02451 430 ProSiteProfiles Protein kinase domain profile. 114 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02451 430 SMART serkin_6 114 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02451 430 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 5 404 - -
Gma06g02451 430 Pfam Protein tyrosine and serine/threonine kinase 116 376 IPR001245 GO:0004672|GO:0006468
Gma06g02451 430 SUPERFAMILY Protein kinase-like (PK-like) 89 376 IPR011009 -
Gma06g02451 430 Gene3D Phosphorylase Kinase; domain 1 86 189 - -
Gma06g02451 430 Gene3D Transferase(Phosphotransferase) domain 1 190 403 - -
Gma06g02451 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Gma06g02451 430 CDD STKc_IRAK 120 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02451 Gma-Chr6 46802924 46807364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02451 104 404 Receptor kinase-like Gene Family AT2G28970 44.304 8.57e-74 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Gma06g02451 PK_Tyr_Ser-Thr 3.4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02451 - - gmx:100786710 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02451 06 46802924 46807364 Gma06g02451 06 46802924 46807364 ECH
Gma12g01237 12 16509929 16513793 Gma06g02451 06 46802924 46807364 GST
Gma13g02522 13 40137873 40142611 Gma06g02451 06 46802924 46807364 PCT
Gma12g02035 12 40972215 40975912 Gma06g02451 06 46802924 46807364 PCT
Gma06g02451 06 46802924 46807364 Gma13g02522 13 40137873 40142611 PCT
Gma06g02451 06 46802924 46807364 Gma12g02035 12 40972215 40975912 PCT