LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma06g02446	atggcttctaaggccatcatccaaTACAGCTCTTCTtcttcttcttctcatgcgatcatcactacatatgatgtgtttgtcagcttccgcggtgaagacacgcgcaacaacttcactgcttttctctttgatgctctctttgaaaatggcatccatgccttcaaagatgatacacatcttcagaaaggcgaatccatagcacccgagctgctactggccattcaggggtctcgccttttcgttgtggtcttctcaaagaactatgcttcctcaacttggtgcttgcgtgaacttgcacacatctgcaactgcactattgaagcatcctcgagtcgtgttcttccaattttctatgatgttgatccatcagaggtgcggaaacagagtggttattatgggattgcctttgcagaacacgaagaaagattcagagaagataaagtgaagatggaggaactgcagagatggagagaagctctgacacaaatggccaacctctctggctgggatatccgaaataagtcacaacctgcaatgattaaagaaattgttcaaaaaataaattatatattgggtcccaaatttcaaaatcttccaagtggtaatctggttgggATGGAATCCCGTGTTGAAGAATTAGAAAAGTGTTTAGCATTGGAGTCGGTCACTGACGTTCGAGTTGTCGGAATTAGTGGAATGGGGGGAATAGGAAAAACGACTCTTGCCCTTGCTTTATACGAAAAGATTGCTTATCAATATGATGTTCATTGTTTTGTTGATGATGTAAACAAAATTTATCGACATTCTGGTTCATTAGGTGTACAAAAACAATTACTTGATCAGTGTCTAAATGATAAAAATCtagagatttgtaatgtttctaggggaacatatttgatagggactaggctacgcaataaacgaggacttatagttcttgataatgttagtcaggttgaacaactacacatgtttacggggagtagagagactctattacgtgagtgcctaggtggagggagcaggatcatcataacttctagggatgaacacatattaaggacacatggagtaaatcatgtttacagagtcaggccattgaatcaagacaatgctgttcagttattttgcaataatgctttcaaatgtgactatattatgagtgattataaaatgttgacacatgatgcactatggcatgctcaaggccatcccttggcaattaaagtaataggcaaatccttgtttggtgtagatgtttcacagtgggaaggtacattggttaggctaagtgaaaataaaagtaagaatattatggacgtgttacgaataagttatgatgctctggaagaaaaagacAAGGAAATATTTTTAGATATTGCTTGCTTTTCCGGTCAGCATTATTTTGAGGATAATGTGAAGGAAATCCTAAATTTTCGTGGATTTAATCCTGAATTTGGCCTCCAAATTCTTGTTGATAAATCACTCATAACCATTAGTTACGGGAAGATTTATATGCATGACTTGTTGAGAGATTTAGGCAAGTGTATTGTTAGAGAAAAATCACCTAAAGAGCCAAGAAAGTGGAGTAGACTATGGGATTGTGAAGATCTCTACAAATTTATGTCGAGCAATAAGGAAGCAAAAAATCTGGAAGCCATAGTTGTTGAAGATGAACCAGGGATGTTTTCTGAAACAACAATGAGATTTGATGCTCTATCAAAAATGAAAAACCTTAAGTTGCTTATACTTCCCAGGTATTATGAGAAGGGGCTTTCCACAATTGAGGAGGAGAAATTTTCAGGAAGCCTTAATTATCTTTCCAATGAATTAGGATATCTTATTTTGCATTTTTATCCCTTTAACTTTCTACCTAAGTGTTTTCAGCCACACAATCTTGTTGAGTTGAATCTTTCTGGGAGTAACATCCAACATTTATGGGACAGCACACAGACTATACCCAATTTGAGACGTTTGAATGTCTCTGACTGCGATAATCTAATGGAGGTGCAAGATTTTGGTGAGGCCCTAAATCTCGAGAGACTAGATCTCAGTGGATGTGGACGACTCAAAAAGCTATGTTTAAGGGGAAACAATTTTGAAACACTACCCAGCCTCGAGGAGCTTTCCAAACTGTTACTTTTAAACTTACAACACTGCAAGAGATTGAAATATTTGCCTGAGCTCCCTTTAGCAACTGATTGGCCTATGAAGAAATGGGGAACTGTTGAAGAAGATGAATATGGATTGGGATTAAATATTTTCAACTGCCCAGAATTAGTTGATAGAGATTGCTGCACCGACAAGTGTTTCTTTTGGATGATGCAAATGGTTCAGCTCTTCACTATTTCACTTAATTGTCATCCTTCCGGGGATTCAATGGCATGGCGGGTTCCATTGATTTCAAGTATTATTCCAGGAAGTGAAATACCAAGGTGGTTCGACGAACAGCATTTGGGCATGGGTAATGTCATAAACATAGACATATCTCACTTTATGCAGCTTGACAAATATTGGATAGGCATTACGTTGAGTGTAATCTTCGTGGTACACAAAGAAAGAAGAATGCCCCCTCCAGACATGGAACAAAGAAAGAAAGAACGTCCATCTCTTTATATTCCGGTTCTTTTCCGTGAAGATCTAGTCACGGATGAATCGGATCACTTGTGGCTATTCTATTACCCTCGATCACATTTTGATGTCTCTAATTTTGATGAGTTGAAAGTGGGTGAGAAGAAATGCATGGTTGGTGGCTAA	2757	0.2271	MASKAIIQYSSSSSSSHAIITTYDVFVSFRGEDTRNNFTAFLFDALFENGIHAFKDDTHLQKGESIAPELLLAIQGSRLFVVVFSKNYASSTWCLRELAHICNCTIEASSSRVLPIFYDVDPSEVRKQSGYYGIAFAEHEERFREDKVKMEELQRWREALTQMANLSGWDIRNKSQPAMIKEIVQKINYILGPKFQNLPSGNLVGMESRVEELEKCLALESVTDVRVVGISGMGGIGKTTLALALYEKIAYQYDVHCFVDDVNKIYRHSGSLGVQKQLLDQCLNDKNLEICNVSRGTYLIGTRLRNKRGLIVLDNVSQVEQLHMFTGSRETLLRECLGGGSRIIITSRDEHILRTHGVNHVYRVRPLNQDNAVQLFCNNAFKCDYIMSDYKMLTHDALWHAQGHPLAIKVIGKSLFGVDVSQWEGTLVRLSENKSKNIMDVLRISYDALEEKDKEIFLDIACFSGQHYFEDNVKEILNFRGFNPEFGLQILVDKSLITISYGKIYMHDLLRDLGKCIVREKSPKEPRKWSRLWDCEDLYKFMSSNKEAKNLEAIVVEDEPGMFSETTMRFDALSKMKNLKLLILPRYYEKGLSTIEEEKFSGSLNYLSNELGYLILHFYPFNFLPKCFQPHNLVELNLSGSNIQHLWDSTQTIPNLRRLNVSDCDNLMEVQDFGEALNLERLDLSGCGRLKKLCLRGNNFETLPSLEELSKLLLLNLQHCKRLKYLPELPLATDWPMKKWGTVEEDEYGLGLNIFNCPELVDRDCCTDKCFFWMMQMVQLFTISLNCHPSGDSMAWRVPLISSIIPGSEIPRWFDEQHLGMGNVINIDISHFMQLDKYWIGITLSVIFVVHKERRMPPPDMEQRKKERPSLYIPVLFREDLVTDESDHLWLFYYPRSHFDVSNFDELKVGEKKCMVGG	918

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma06g02446	918	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	19	726	-	-
	Gma06g02446	918	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	19	726	IPR044974	GO:0006952
	Gma06g02446	918	ProSiteProfiles	TIR domain profile.	21	191	IPR000157	GO:0007165
	Gma06g02446	918	Pfam	TIR domain	23	194	IPR000157	GO:0007165
	Gma06g02446	918	Gene3D	-	195	360	IPR027417	-
	Gma06g02446	918	SUPERFAMILY	"Winged helix" DNA-binding domain	437	541	IPR036390	-
	Gma06g02446	918	Gene3D	-	366	450	IPR042197	-
	Gma06g02446	918	SMART	till_3	22	166	IPR000157	GO:0007165
	Gma06g02446	918	Gene3D	-	20	194	IPR035897	-
	Gma06g02446	918	SUPERFAMILY	L domain-like	569	731	-	-
	Gma06g02446	918	Pfam	NB-ARC domain	207	441	IPR002182	GO:0043531
	Gma06g02446	918	ProSiteProfiles	Leucine-rich repeat profile.	689	710	IPR001611	GO:0005515
	Gma06g02446	918	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	195	460	IPR027417	-
	Gma06g02446	918	Gene3D	Ribonuclease Inhibitor	561	739	IPR032675	-
	Gma06g02446	918	PRINTS	Disease resistance protein signature	227	242	-	-
	Gma06g02446	918	PRINTS	Disease resistance protein signature	401	415	-	-
	Gma06g02446	918	PRINTS	Disease resistance protein signature	707	723	-	-
	Gma06g02446	918	PRINTS	Disease resistance protein signature	303	317	-	-
	Gma06g02446	918	SUPERFAMILY	Toll/Interleukin receptor TIR domain	14	169	IPR035897	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma06g02446	Gma-Chr6	46749060	46753342	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma06g02446	204	730	WRKY Transcription Factor Family	AT5G45050	33.948	1.20e-75	268

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma06g02446	-		-	gmx:100820033	1343.56