Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02440 ATGACCATTAGGGAGGGGAGGATTAAAATGCATCCCTTGTTGATGGATTTGGGCAGGTATGTTGTTCGGGAAAAATCACCTAAGAGACCATGGAAGTGGACTAGGTTGTGGCATTATCGAGATCTCCATAAAGTCATGTCAAAAAATATGGCGGCAAATAATCTTGAAGTCATAGTTGTTCTAGCTGACGACGAACTTAATGAAATAGAAATGCAGGTTGATGCTCTATCAAAATCGAATCACCTAAAGTTTCTCTCACTTCAGAATGTAAATTTTTCAGGAAGTCTCGAATATCTTTCCAGAGAATTAATATATCTTATTTGGCATAAATATCCTTTTGTGTGTTTGCCCCCAAGTTTTCTGCCAGACAAACTTGTTGAGTTGATTCTACCTAAAAGCAACATAAAAATACTATGGGAAGGTAAAAAGCCGATACCCAATTTGAGACGTTTGAATGTCTCTTACTGCAAATATCTAATCGAGGTGCCCAATTTTGGTGAGGCCCTAAATCTTGAATGGCTAAATCTCGAAAGATGTAAACGACTCAAGCGGTTCCATCCATCCGTTGGTTTTCCTAGAAATCTTACCTATCTGAATTTAAGAGGCTGCAAAAGTCTTGTCGAGTTACCACATTTTGAACAGGCCCTAAAGCTTGAAATTTTAGATCTGAGACGATGTGAACTACTAAAACAGCTACCCTCATCCATTGGTCGTCTAAGAAAGCTTACTCCTTCATTAGAATTGGGAAAATGTAAAAGTCTCACTGacttgccacattttgtagaggacctaaatcttttgaagaagttaaatctcgaaagatgtgaacaactaaggcagatacatccatccattggtcttctaagaaaccttattgttttaaatttgagagattgcaaaagtctcgtaaacttgccacattttgtagaggacctaaatcttatggagttaaatctcaaaggatgtgaagaactaaggcagatagatccatccattggtcgtctaagaaagcttactgctttaaatttgacagattgcaaaagtctagtaaacttgccacattttgtagaggacctaaatcttatggagttaaatctcaaaggatgtgaagaactaaggcagatagatccatccattggtcgtctaagaaagcttactgctttaaatttgacagattgcaaaagtctagtaaacttgccacattttgtagaggacctaaatcttcaagagttaaatctgaaaggatgtgtacaactaaggcagatacattcatccattggtcatctaagaaagcttactgctttaaatttgatagattgcaaaagtctagtaaacttgccacattttgtagaggacctaaatcttatggagttaaatctcaaaggatgtgaagaactaaggcagatacatccatccattggtcatctaagaaaacttactgttttaaatttgagagattgcaaacgtctcgtaaacttgccacattttgtagaggaactaaatcttgaagagttaaatctggaaggatgtgtacaactaaggcagatacatccatccattggtcatctaaggaagcttactattttaaatttgaaagattgcaaaagtcta 1611 0.1825 MTIREGRIKMHPLLMDLGRYVVREKSPKRPWKWTRLWHYRDLHKVMSKNMAANNLEVIVVLADDELNEIEMQVDALSKSNHLKFLSLQNVNFSGSLEYLSRELIYLIWHKYPFVCLPPSFLPDKLVELILPKSNIKILWEGKKPIPNLRRLNVSYCKYLIEVPNFGEALNLEWLNLERCKRLKRFHPSVGFPRNLTYLNLRGCKSLVELPHFEQALKLEILDLRRCELLKQLPSSIGRLRKLTPSLELGKCKSLTDLPHFVEDLNLLKKLNLERCEQLRQIHPSIGLLRNLIVLNLRDCKSLVNLPHFVEDLNLMELNLKGCEELRQIDPSIGRLRKLTALNLTDCKSLVNLPHFVEDLNLMELNLKGCEELRQIDPSIGRLRKLTALNLTDCKSLVNLPHFVEDLNLQELNLKGCVQLRQIHSSIGHLRKLTALNLIDCKSLVNLPHFVEDLNLMELNLKGCEELRQIHPSIGHLRKLTVLNLRDCKRLVNLPHFVEELNLEELNLEGCVQLRQIHPSIGHLRKLTILNLKDCKSL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02440 537 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 396 454 - -
Gma06g02440 537 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 490 537 - -
Gma06g02440 537 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 8 212 - -
Gma06g02440 537 Pfam Leucine Rich Repeat 124 143 IPR011713 -
Gma06g02440 537 SUPERFAMILY L domain-like 76 400 - -
Gma06g02440 537 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 443 497 IPR044974 GO:0006952
Gma06g02440 537 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 302 360 IPR044974 GO:0006952
Gma06g02440 537 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 349 407 - -
Gma06g02440 537 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 252 313 - -
Gma06g02440 537 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 396 454 IPR044974 GO:0006952
Gma06g02440 537 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 252 313 IPR044974 GO:0006952
Gma06g02440 537 SUPERFAMILY L domain-like 360 535 - -
Gma06g02440 537 Gene3D Ribonuclease Inhibitor 358 453 IPR032675 -
Gma06g02440 537 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 443 497 - -
Gma06g02440 537 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 302 360 - -
Gma06g02440 537 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 212 IPR044974 GO:0006952
Gma06g02440 537 Gene3D Ribonuclease Inhibitor 454 537 IPR032675 -
Gma06g02440 537 Gene3D Ribonuclease Inhibitor 42 244 IPR032675 -
Gma06g02440 537 Gene3D Ribonuclease Inhibitor 245 357 IPR032675 -
Gma06g02440 537 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 349 407 IPR044974 GO:0006952
Gma06g02440 537 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 490 537 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02440 Gma-Chr6 46637990 46697072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02440 302 531 WRKY Transcription Factor Family AT4G12020 30.252 5.64e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02440 - - gmx:100815768 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02440 06 46637990 46697072 Gma06g02440 06 46637990 46697072 ECH