Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02433 atgttcagctcttcttcatctgacgccataaagaaatatgatgtgtttgtgagcttccgcggtgaagacacacgcaacaactttactgcttttcttttacaagctctccgtagaaaaggcattaatgccttcaaagatgatgaaaatctcaagaaaggtgaattcatagaacccgagctgcgggaagctattgaagggtctcgaattttcattgtggtcttctcaaagaactatgcttcctctacttggtgtttgggtgaacttgcacacatctgctactgtattgaaacatcacgaagaccagttctgcctattttttatgatgttgatccattggaggtgcgtaaacagagtggatgttatgagaaagcatttgtggaacatgaagaaagattcatagaagatagcaagaagatgaaagaagttcatagatggagagaagctctgaaacaagtggctaatttcaaaagtggttgggatatcagaaataagtcacaacatgcaatgattaaagaaattgttcaaaaaataaaaaatatattgagtcccaaatttcaaaatcttccaaatggtaatctggttgggATGGAATCCCGTGTTGAAGAATTAGAAAAGTGTTTAGCATTGGAGTCGGTTAGTGATGTTCGAGTTGTTGGAATTAGTGGAATGAAGGGAATAGGAAAGACGACTCTTGCCCGTGCTTTATACGAAAAAATAGCTGATCGATATGATTTTCATTGTTTTGTTGATGATCTAAACAAAATTTATCAACTTTCTGGTTCACTAGGTCTACAAAAAGAATTACTTTCTCAATTTTTAAATGATGAAAATCtagagatttgcaatgcttctgtgggaacatatttgatatggactatgctacgcaataaacgaggacttatagttcttgataatgttaatcaggatgaacaactatgtatgtttacagggggtatagagactctattatgtgaatgtcttggtgaagggagcagaatcattataatttctaggaatgaacacatattaaggacacatggagtacatcatgtttaccaagtccagccgttgaatcaagacaatgttgttaagttattttgcaaaaatgctttcagatgtgactatattatgagtggttatgaaatgttgacacatgatgtactatcacatgctcaaggccatcccttgacaattgaagtaatgggcaaatctttggttggtcgaaatgtttctcagtggaaaagtgcattggttaggttaagtgaaattaaaagtaaggatattatggacgtgttgcgaacaagttatgatgatctggaaaaaaaagaTAAGGAAATATTTTTAGATATTGCTTGCTTCTTCGGTCAGGATTCTGAGGATTATGTGAAGGAAATCCTAGATTTTCGTGGATTTTATCCTGAAATTGGCCTCCAAATTCTTGTTGAAAAATCACTCATAACAATTAGTCACGGGGTAATTCATATGCATAGCTTGCTGAGAGATTTAGGCAAGTGTATTGTTAGAGAAAAATCACCTAAAAAGCCAAGAAAGTGGAGTAGACTATGGGATTGTGAAAATCTCTACAAAGTTATGTCGGACAATATGTGTCTGCCCAATCTGAGACGTGTTGATCTCTCTTACTCCAAAAATCTAATCAAGATGCCAAATTTTGGAGAGGCCCTAAACCTTGAACGGCTAAATCTTGAAGGATGTATACAACTCAAACATATTGGCTCATCCATTGGTCATCTAAGAAAGCTCACTTCTGTGATTCTGGAAAATTGCAAGGGACTTGTCAAGTTACCAAATTTTGGAGAGGGCCACATTCTTCAATGCCTAAATCTTGGGGGATGTATACAACTGAGCCACATCAATCCATCGATTGGTCTTCTAAAAAAGCTTACTTTTTTGAATTTGAAAGACTGCAAAAGTCTTGTAAGCTTACCGAACTACATATTGAGCCTCAGTTCTCTCGAATGTCTGAATCTCTCCGGCTGTTCAAAATTGAATAATATTGGACCTTTACATTCTATTCATTGCTGGTTTCCTCCCTGTATGCGTCAATGTGATATAAGTTTCTGCAATTTACTTCAAATCCCTGATGCTATTGGAGACTTACCTTGCTTAGAAACCTTAAATGTAAGTGGAAACAATTTTGCTACCCTTCCCAACCTCAAGGAGCTTCGCAGACTGTTCCATTTAAACTTACAGCACTGCAAGAAGTTGAAAGATTTTCCTGAGCTCCCTTCACGAGTTGACCTGCTGTCAAAAGCTTACATGCCACCATGGCCAGTTATAGAACCTCTACCTCGGGGAAGAGTAGCAGGATTATATATTTTCAACTGCCCAAAATTAGTTGAGAGGGAACACTGCGCCAGCAAGACTATTTCATGGATGATAAAAGTTATTCAGGAAGGCCACCAATACAAACAACTTGAGTTCCATCTGGTGTTTCCAAGAATTGAAGTTATTATTCCTGGAAGTGAAATACCAAGTATTCTCTGCTGGTCACCAAAGGGGAAATTTTTCAGTGATGAGTCCTCCAAAAACAAATGGAGTTTTCCCTGCTAA 2571 0.2209 MFSSSSSDAIKKYDVFVSFRGEDTRNNFTAFLLQALRRKGINAFKDDENLKKGEFIEPELREAIEGSRIFIVVFSKNYASSTWCLGELAHICYCIETSRRPVLPIFYDVDPLEVRKQSGCYEKAFVEHEERFIEDSKKMKEVHRWREALKQVANFKSGWDIRNKSQHAMIKEIVQKIKNILSPKFQNLPNGNLVGMESRVEELEKCLALESVSDVRVVGISGMKGIGKTTLARALYEKIADRYDFHCFVDDLNKIYQLSGSLGLQKELLSQFLNDENLEICNASVGTYLIWTMLRNKRGLIVLDNVNQDEQLCMFTGGIETLLCECLGEGSRIIIISRNEHILRTHGVHHVYQVQPLNQDNVVKLFCKNAFRCDYIMSGYEMLTHDVLSHAQGHPLTIEVMGKSLVGRNVSQWKSALVRLSEIKSKDIMDVLRTSYDDLEKKDKEIFLDIACFFGQDSEDYVKEILDFRGFYPEIGLQILVEKSLITISHGVIHMHSLLRDLGKCIVREKSPKKPRKWSRLWDCENLYKVMSDNMCLPNLRRVDLSYSKNLIKMPNFGEALNLERLNLEGCIQLKHIGSSIGHLRKLTSVILENCKGLVKLPNFGEGHILQCLNLGGCIQLSHINPSIGLLKKLTFLNLKDCKSLVSLPNYILSLSSLECLNLSGCSKLNNIGPLHSIHCWFPPCMRQCDISFCNLLQIPDAIGDLPCLETLNVSGNNFATLPNLKELRRLFHLNLQHCKKLKDFPELPSRVDLLSKAYMPPWPVIEPLPRGRVAGLYIFNCPKLVEREHCASKTISWMIKVIQEGHQYKQLEFHLVFPRIEVIIPGSEIPSILCWSPKGKFFSDESSKNKWSFPC 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02433 856 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 528 779 - -
Gma06g02433 856 Gene3D - 356 440 IPR042197 -
Gma06g02433 856 Gene3D - 5 179 IPR035897 -
Gma06g02433 856 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 528 779 IPR044974 GO:0006952
Gma06g02433 856 Pfam NB-ARC domain 197 431 IPR002182 GO:0043531
Gma06g02433 856 Pfam TIR domain 12 187 IPR000157 GO:0007165
Gma06g02433 856 Gene3D Ribonuclease Inhibitor 520 680 IPR032675 -
Gma06g02433 856 Gene3D Ribonuclease Inhibitor 681 787 IPR032675 -
Gma06g02433 856 SMART till_3 12 155 IPR000157 GO:0007165
Gma06g02433 856 PRINTS Disease resistance protein signature 293 307 - -
Gma06g02433 856 PRINTS Disease resistance protein signature 217 232 - -
Gma06g02433 856 PRINTS Disease resistance protein signature 391 405 - -
Gma06g02433 856 PRINTS Disease resistance protein signature 653 669 - -
Gma06g02433 856 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 535 IPR044974 GO:0006952
Gma06g02433 856 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 155 IPR035897 -
Gma06g02433 856 SUPERFAMILY L domain-like 495 747 - -
Gma06g02433 856 ProSiteProfiles Leucine-rich repeat profile. 708 729 IPR001611 GO:0005515
Gma06g02433 856 Gene3D - 180 350 IPR027417 -
Gma06g02433 856 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 535 - -
Gma06g02433 856 ProSiteProfiles TIR domain profile. 11 181 IPR000157 GO:0007165
Gma06g02433 856 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 450 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02433 Gma-Chr6 46548523 46553414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02433 2 755 WRKY Transcription Factor Family AT4G12020 28.954 4.29e-72 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02433 - - gmx:100814717 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02433 06 46548523 46553414 Gma06g02433 06 46548523 46553414 ECH