Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02430 ATGCATCTCACTACCTCCGTCGCCGTCCTCGTCGGCTGCGTCGTTGTCTTCATCTGGCGGAGATCCTCCTCCCCCAAGGCCAAGAAGGTCAcctcgaattccgcttctgcaattgcaatggcttctaatgcgaccatccCTACatatgatgtgtttgtcagcttccgcggtgaagacacgcgcaacagcttcactgcttttctctttgatgctctctctcaaaatggcatccatgccttcaaagatgatacacatcttcagaaaggcgaatccatagcgcccgagctgctacaggccattcaagggtctcgccttttccttgtggtcttctctaagaactatgcttcctcaacttggtgcttgcgtgaacttgcacacatctgcaactgcactattgaagcatccccgagtcgtgttcttccaattttctatgatgttgatccatcagagctgcggaaacagagtggttattatgggattgcctttgcagaacacgaacgaagattcagaggagataaagagaagatggaggaagtgcagagatggagagaagctctgacacaagtggccaatatctctggctgggatatccaaaataagtcacaacctacagtgattaaagaaattgttcaaaaaataaaatgtatattgggtcccaattttcaaaatcttccaaatggtagtctagttgggATGGAGTCCCATGTCAAAGAATTAGAAAAGTGTTTAGAATTGGAGTCGGTTAGTGACAGTCGAGTTCGAGTTGTTGGAATTAGTGGAATGGGGGGAATAGGAAAAACGACTCTTGCCCATGCTTTATACAAAAAGATTGCCCATCAATATGATTTTCATTGTTTTGTTGATGTAGGAACACAATCTAATTCACTAGGTGTACAAAAAGAATCACTTCATCATTGTCTAAATGGTGAAAATCTACAAATTTGtgatgtttttacgggaacacatatgatatcatctagactacgcaataagcgaggatttatagttcttgataatgttagttgggatgaacaactatgtatgactctattacgtgaatatcttggtgaagggagcataatcatcataatttctaggaatgaacacatattaaggacacatggagcaaatcatgtttaccaagtacaaccgttgaatcacaacaatgctgttcagttattttgcaaaaatgctttcaaatgtgactatattatgagtggttacgaaatgttgacacgttatgtactatcacatgctgaaggccatcccttggcaattaaagtaataggcaattttttgtatggtcgaaatgttccgcagtgggaaggtacattggataggctaagtaaagataaaagtaaggatattatggaggtgttgcgaataagttatgatgatctggaagaaaaggacAAGGAAATATTTTTAGATATTGCTTGCTTCTTCGGTCAAGGTTATTATGAGGATTATGTGAAGGAAATCCTAGATTTTCGGGGATTTGATCCTAAAATTGGCCTCCCAATTCTTGTTGATAAATCACTCATAACCATCAGTAGTAGCAGGAGGGTTGATATGCATCCCTTGCTCAGAGATTTAGGCAAGCGTATTGTTAGAGAAAAATCACCTAAAGAGCCAAGAAAGTGGAGTAGACTCTGGAATTTGGAAGATATCTACAATGTTATGTCGGACAATATGGAAGCAAAAAATCTGGAAGCCTTAGTTGTTGAATATAAATCATGGATGTTTTTTGAAACAACACTTAGAGTTGATGCTCTATCAAAAATGAAAAACCTTAAGTTGTTTATGCTTCCCAAGTATCCCTGGAGGAGGGTTACCCCAAATGAGATGAAGATGAAATTTTCAGGAAATCTCAATTATCTTTCCAATAATAAATTAGGATATCTTATTTGGCCATACTATCCCTTTAACTTTCTACCTCAATGTTTTCAGCCACACAATCTTATTGAGTTGGATCTTTCTGGGAGTAACATCCAACATTTATGGGACAGCACACAGCCTATACCCAAACTGAGACGTTTGAATCTCTCTTTCTGCGTTAATCTAATTGAGGTGCCAGATTTTAGTGAGGCCCTAAATCTCGAGAGACTAGATCTCAGTGGATGTACACGACTCAGTCGGTTCCATCCATCCATTGGTTTTCCTAGAAATCTTACCTATTTGAATTTATTTGGCTGCAAAAGACTTGTCGAGTTACCACATTTTGAACAGGCCCTAAATCTTGAACAGTTATATCTGGGAGGATGTGAACTACTGAAACAGCTACCCCCATCCATTGGTCGTCTAAGAAAGCTTAAATTTTCATTAGATTTGGAAGAGTGTAAAAGTCTCACTGACttgccacattttgcagaggacctaaatttttcctggttaaatctcagaggatgtatagaactaaggcagatacatccatccattggtcacctaagaaagctttctgttttacatttgcaaaattgcaaaagtctcgtaaagttgccagattttgcagaggacctaaatcttacagagttaaatctcgaaggatgtgaacaactaaggcagatacatccatccattggtcatctaacaaagctt 2598 0.1932 MHLTTSVAVLVGCVVVFIWRRSSSPKAKKVTSNSASAIAMASNATIPTYDVFVSFRGEDTRNSFTAFLFDALSQNGIHAFKDDTHLQKGESIAPELLQAIQGSRLFLVVFSKNYASSTWCLRELAHICNCTIEASPSRVLPIFYDVDPSELRKQSGYYGIAFAEHERRFRGDKEKMEEVQRWREALTQVANISGWDIQNKSQPTVIKEIVQKIKCILGPNFQNLPNGSLVGMESHVKELEKCLELESVSDSRVRVVGISGMGGIGKTTLAHALYKKIAHQYDFHCFVDVGTQSNSLGVQKESLHHCLNGENLQICDVFTGTHMISSRLRNKRGFIVLDNVSWDEQLCMTLLREYLGEGSIIIIISRNEHILRTHGANHVYQVQPLNHNNAVQLFCKNAFKCDYIMSGYEMLTRYVLSHAEGHPLAIKVIGNFLYGRNVPQWEGTLDRLSKDKSKDIMEVLRISYDDLEEKDKEIFLDIACFFGQGYYEDYVKEILDFRGFDPKIGLPILVDKSLITISSSRRVDMHPLLRDLGKRIVREKSPKEPRKWSRLWNLEDIYNVMSDNMEAKNLEALVVEYKSWMFFETTLRVDALSKMKNLKLFMLPKYPWRRVTPNEMKMKFSGNLNYLSNNKLGYLIWPYYPFNFLPQCFQPHNLIELDLSGSNIQHLWDSTQPIPKLRRLNLSFCVNLIEVPDFSEALNLERLDLSGCTRLSRFHPSIGFPRNLTYLNLFGCKRLVELPHFEQALNLEQLYLGGCELLKQLPPSIGRLRKLKFSLDLEECKSLTDLPHFAEDLNFSWLNLRGCIELRQIHPSIGHLRKLSVLHLQNCKSLVKLPDFAEDLNLTELNLEGCEQLRQIHPSIGHLTKL 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02430 866 SMART till_3 48 192 IPR000157 GO:0007165
Gma06g02430 866 SUPERFAMILY Toll/Interleukin receptor TIR domain 48 195 IPR035897 -
Gma06g02430 866 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 783 830 - -
Gma06g02430 866 Coils Coil 450 470 - -
Gma06g02430 866 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 45 734 - -
Gma06g02430 866 PRINTS Disease resistance protein signature 419 433 - -
Gma06g02430 866 PRINTS Disease resistance protein signature 814 830 - -
Gma06g02430 866 PRINTS Disease resistance protein signature 255 270 - -
Gma06g02430 866 PRINTS Disease resistance protein signature 327 341 - -
Gma06g02430 866 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 829 866 IPR044974 GO:0006952
Gma06g02430 866 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 783 830 IPR044974 GO:0006952
Gma06g02430 866 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 221 478 IPR027417 -
Gma06g02430 866 ProSiteProfiles TIR domain profile. 47 217 IPR000157 GO:0007165
Gma06g02430 866 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 45 734 IPR044974 GO:0006952
Gma06g02430 866 Pfam NB-ARC domain 235 465 IPR002182 GO:0043531
Gma06g02430 866 Gene3D Ribonuclease Inhibitor 557 740 IPR032675 -
Gma06g02430 866 Gene3D - 220 379 IPR027417 -
Gma06g02430 866 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 735 786 IPR044974 GO:0006952
Gma06g02430 866 Gene3D - 47 219 IPR035897 -
Gma06g02430 866 Pfam TIR domain 49 214 IPR000157 GO:0007165
Gma06g02430 866 Gene3D Ribonuclease Inhibitor 741 866 IPR032675 -
Gma06g02430 866 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 735 786 - -
Gma06g02430 866 Gene3D - 384 468 IPR042197 -
Gma06g02430 866 SUPERFAMILY L domain-like 586 866 - -
Gma06g02430 866 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 829 866 - -
Gma06g02430 866 SUPERFAMILY "Winged helix" DNA-binding domain 455 561 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02430 Gma-Chr6 46522932 46526067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02430 230 857 WRKY Transcription Factor Family AT5G45050 33.692 1.33e-83 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02430 - - gmx:100815768 1427.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02430 06 46522932 46526067 Gma06g02430 06 46522932 46526067 ECH