Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02427 atggcttctaacaccatcatccaaTACAGCTCTtcttcttcatctcgtgcgatcatcactacgtatgatatgtttgtcagcttccgcagtgaagacacgcgcaacaacttcactaattttctctatgatgctctctctcaaaattgcatccatgccttcaaagatgatgcagatctcaagaaaggcgaatccatagcacctaagctgctacaggccattgaagggtctcgccttttcgctgtggtcttctctaagaactatgcttcctcaacttggtgcttgggtgaacttgcacacatctgcaactgcactattgaagcatcccggggtcgtgttcttccaattttctatgatgttgatccatcagaggtgcggaaacagagtggttattatgggatagcctttgaagaacacgaaggaagattcagagaagataaagagaagatggaggaagaactgagatggagagaagctctgacacaagtggccaatctctctggctgggatatccgaaataagtcacaacctgcaatgattaaagaaattgttcaaaacataaaatatatattgggtcccaaatttcaaaatcctccaaatggtaatctagttGGTATGGAATCCAGTGTTGAAGAATTAGAAAAGTGTTTAGCATTGGAGTCGATTAGTGACGTTCGGGTTGTCGGAATTAGTGGAATGGGAGGAATAGGAAAGACAACTCTTGCCCGTGCTTTATACGAAAAGATTGCTGATCAATATGATTTTCATTGTTTTGTTGATGATGTAAACAATATTTATCGACATTCTAGTTCACTAGGTGTACAAAAACAGTTACTTTCTCAGTGCCTAAATGATGAAAATCtagagatttgcaatgtttctaagggaacatatttggtatcgactatgctacgcaataaaagaggacttatagttcttgataatgttggtcaagttgaacaactacatatgtttacacgaagcagagagactctattacgtgaatgcctaggtggagggagtagaatcatcataacttctagggatgaacacatattaaggacacatggagtaaatcatgtttaccaagtccaaccgttgagttgggacaatgctgttaagttattttgcataaatgctttcaaatgtacctatattatgagtgattatgaaatgttgacacatggtgtactatcacatgctcaaagccatcccatggcaattgaagtaatagacaaatctttgtttggtcgaaatgtttcacagtggagaagtacattggataagctaagagataataaaagtaggaatattatggatgtgctgcgaataagttatgatgatctagaagaaaaagaTAGGGAAATATTTCTTGATATTGCTTGTTTCTTCAATGATGATCATGAGCAACATGTGAAGGAAATCCTAAATTTTCGTGGATTTGATCCTGAAATTGGCCTACCAATTCTTGTTGAAAAATTACTCATAACCATTAGTGATGGCTCGATTCATATGCATGACTTGCTGAGAGATTTAGGCAAGTGTATTGTTCGAGAAAAATCACCTAAAGAGCCAAGAAAGTGGAGTAGATTGTGGGATTTTGAAGATATCTACAAAGTTATGTTGGACAATATGGAAGCAAAAAATATTGAAGCCATAGTTGTTAAATATATTTCGTGGAGGGTTCTAGGAACAACAATGAGAGTTGATGCTTTATCCAAAATGAGAAACCTTAAGTTGCTTATGTTTCCCATTGCTTGGACATTTTCAGGAAACCTCAATTATCTTTCCAATGAATTAGGATATCTTTATTGGAAACGATATCCCTTTAACTTGCTGCCTCCATGTTTTCAGCCACACAAACTTGTTGAGTTGGATTTTTGTGGGAGTAAAATCAAACAATTATGGGAAGGCAGAAAGCCTCTACCCAATTTGAGACTTTTGGATGTCTCTAACTGCAAAAATCTAATCGAGGTTCCAAATTTTGGTGAGGCCCCAAATCTTGCGAGTCTAAATCTCTGTGGATGTATACGACTCAGGCAGCTAACCTCATCCATTGGTCTTCTGAGAAAGCTTACTATTTTAAATTTGAAAGAGTGCAGAAGTCTCATTGACTTGCCACATTTTGTACAGGGCCTAAATCTTGAAGAGTTAAATCTGGAAGGATGTGTACAACTAAGGCAGATACATCCATCCATTGGTCACCTAAGAAAGCTTACTGTTTTAAATTTGAAAGATTGCATAAGTCTCGTAAGCATACCCAACACCATATTGGGACTCACTTCTCTTGAATGCCTAAGTCTTTCCGGCTATTCAAAACTATATAATATCCATTTATCAGAAGAACTAAGGGATGCAAGGTATTTGAAGAAGCTTCGTATGGGTGAAGCTCCTAGTTGCTCCCAATCAATATTCTCATTCCTCAAAAAGTGGCTTCCATGGCCTTCTATGGCCTTCGACAAAAGCCTGGAGGATGCATATAAAGATTCAATTAGATGTTTAGTTTTTTCTAGTAGTGCTATTTTATCATGTATGCGTGAACTTGATCTAAGTTTCTACAATTTACGTAAATTCCCTGATGCTTTTGGAAATTTGCATTGCTTAGAAAAGCTATGTTTAAGGGGAAACAATTTTGAAAGACTACCCAGCCTCAAGGAGCTTTCCAAACTGTTACATTTAAACTTACAACACTGCAAGAGATTGAAATATTTGCCAGAGCTCCCTTCACGAACTGATGTCCCATCACCATCAAGTAACAAGCTGCGGTGGACAAGTGTTGAAAATGATGAAATAGTATTGGGATTAAATATTTTCAACTGCCCAGAATTAGTTGAGGGGGATTGCTGCACCAGCATGTGTTTGTCATGGATGATGCAAATGGTTCAG 2883 0.2317 MASNTIIQYSSSSSSRAIITTYDMFVSFRSEDTRNNFTNFLYDALSQNCIHAFKDDADLKKGESIAPKLLQAIEGSRLFAVVFSKNYASSTWCLGELAHICNCTIEASRGRVLPIFYDVDPSEVRKQSGYYGIAFEEHEGRFREDKEKMEEELRWREALTQVANLSGWDIRNKSQPAMIKEIVQNIKYILGPKFQNPPNGNLVGMESSVEELEKCLALESISDVRVVGISGMGGIGKTTLARALYEKIADQYDFHCFVDDVNNIYRHSSSLGVQKQLLSQCLNDENLEICNVSKGTYLVSTMLRNKRGLIVLDNVGQVEQLHMFTRSRETLLRECLGGGSRIIITSRDEHILRTHGVNHVYQVQPLSWDNAVKLFCINAFKCTYIMSDYEMLTHGVLSHAQSHPMAIEVIDKSLFGRNVSQWRSTLDKLRDNKSRNIMDVLRISYDDLEEKDREIFLDIACFFNDDHEQHVKEILNFRGFDPEIGLPILVEKLLITISDGSIHMHDLLRDLGKCIVREKSPKEPRKWSRLWDFEDIYKVMLDNMEAKNIEAIVVKYISWRVLGTTMRVDALSKMRNLKLLMFPIAWTFSGNLNYLSNELGYLYWKRYPFNLLPPCFQPHKLVELDFCGSKIKQLWEGRKPLPNLRLLDVSNCKNLIEVPNFGEAPNLASLNLCGCIRLRQLTSSIGLLRKLTILNLKECRSLIDLPHFVQGLNLEELNLEGCVQLRQIHPSIGHLRKLTVLNLKDCISLVSIPNTILGLTSLECLSLSGYSKLYNIHLSEELRDARYLKKLRMGEAPSCSQSIFSFLKKWLPWPSMAFDKSLEDAYKDSIRCLVFSSSAILSCMRELDLSFYNLRKFPDAFGNLHCLEKLCLRGNNFERLPSLKELSKLLHLNLQHCKRLKYLPELPSRTDVPSPSSNKLRWTSVENDEIVLGLNIFNCPELVEGDCCTSMCLSWMMQMVQ 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02427 961 Gene3D - 19 191 IPR035897 -
Gma06g02427 961 SUPERFAMILY L domain-like 504 955 - -
Gma06g02427 961 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 701 IPR044974 GO:0006952
Gma06g02427 961 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 19 701 - -
Gma06g02427 961 SMART till_3 21 165 IPR000157 GO:0007165
Gma06g02427 961 Pfam NB-ARC domain 206 439 IPR002182 GO:0043531
Gma06g02427 961 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 459 IPR027417 -
Gma06g02427 961 Pfam TIR domain 22 196 IPR000157 GO:0007165
Gma06g02427 961 Gene3D - 192 359 IPR027417 -
Gma06g02427 961 Gene3D - 366 449 IPR042197 -
Gma06g02427 961 PRINTS Disease resistance protein signature 302 316 - -
Gma06g02427 961 PRINTS Disease resistance protein signature 639 655 - -
Gma06g02427 961 PRINTS Disease resistance protein signature 400 414 - -
Gma06g02427 961 PRINTS Disease resistance protein signature 226 241 - -
Gma06g02427 961 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 168 IPR035897 -
Gma06g02427 961 Gene3D Ribonuclease Inhibitor 564 712 IPR032675 -
Gma06g02427 961 Gene3D Ribonuclease Inhibitor 713 811 IPR032675 -
Gma06g02427 961 Gene3D Ribonuclease Inhibitor 815 954 IPR032675 -
Gma06g02427 961 ProSiteProfiles TIR domain profile. 20 190 IPR000157 GO:0007165
Gma06g02427 961 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 701 922 IPR044974 GO:0006952
Gma06g02427 961 ProSiteProfiles Leucine-rich repeat profile. 866 887 IPR001611 GO:0005515
Gma06g02427 961 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 701 922 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02427 Gma-Chr6 46488323 46498460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02427 203 806 WRKY Transcription Factor Family AT5G45050 30.253 2.21e-73 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02427 - - gmx:100814717 1823.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02427 06 46488323 46498460 Gma06g02427 06 46488323 46498460 ECH