Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02422 ATGAGGAACTGTGACGTACATGGTATTGTTGTTGGTGGTGCTGCTGCTGCTGTTACTATTATTGTTATTGTATGCTTCGTTTATTCTTACTCCTTGAAATTTGCCCTTTCTACTCATTTTGATTCTGATACTGTTTCTTCTGCATTAAGTGACAGCCAGGAGCAGCACAACTCCGGGGGAATTCACTCTGTTGTCAACTCCTGTAACTCTTTGCAGGAAAGCAATCATTATTTGCATAGGCCTGTCTCATCTGTAGACCATCTCGAACACGGATTGCATCTATCTACTAGGAGCTTTTTTCCACAGGATGCAAGTTATGACCATGAAACCAGACATGCATTGCTGGAATTAGAAACTGCTTTGATGGCTCCTGATGGCGAAGATCAAGTCACCACATCAAGCACTTCTTTGGGTGATAGCAGTAGGCCTACAACATCGGACCAAAGAAATAGGTCTTGGAGCCATGAGGGCCAATCAAGTTTTGATCAGTTAATAGAGAAGACTAGAAGTGCTGTGTCTATAACTGGGGAGCCAATCCAGCGCCTTGGTGCTTATTTGGTAGAAGGGCTTGTTGCAAGGAAGGAGGCATCAGGAAATAACATCTACCATGCCCTAAGATGCATAGAGCCTGAGGGAAAAGACTTACTCTCTTACATGCAGCTACTGTATGAAATCTGTCCCTACTTAAAATTTAGTTACATGGCTACCAACGGCGATATTGCTGAAGCATGTAGGAATGAGGACCTAATTCATATCATAGACTTTCAGATTGGTCAGGGAACTCAATGGATGACACTTCTTCAAGCACTTGCAGCAGGACCTGGTGGAGCTCCCCATGTGCGGATCACAGGGATTGACGATCAACTTTCTAAATATGTTCGGGGAGATGGATTGGAAGCCGTTGGGAAAAGGTTGGCTGCAATCTCTCAGACATTTAACATCCCAGTTGAGTTCCATGGCGTGCCTGTTTTAGCTCCAGATGTGACAAAAGACATGCTTGATGTTAGGCCTGGTGAGGCTTTGGCTGTGAACTTCCCTTTGCAACTCCATCATACAGCTGATGAAAGTGTTGATATGAGTAATCCAAGGGATGGACTTTTGAGATTGGTGAAATCACTTACTCCCAAGGTAACTACTTTGGTAGAGCAAGAATCGAACACAAATACCACTCCCTTCTTCAACAGGTTTATAGAAACCTTGGATTACTACTTAGCAATTTTCGAGTCCATTGATGTGTCTCTTCCGAGAAAGAGCAAGGAGCGGGTTAATGTGGAGCAACATTGTTTGGCTCGGGATATTGTCAACATTATTGCTTGCGAAGGGAAAGAAAGGGTAGAGAGACATGAGCTGTTAGGAAAGTGGAAGTCGAGATTAACAATGGCTGGCTTTCGTCAATATCCTTTGAGTTCTTATGTGAATTCTGTCATAAGAAGCCTGCTGAGGTGCTATTCAGAACATTATAATCTTGTGGAGAAGGATGGAGCCATGCTACTGGGATGGAAGGACTGA 1509 0.4367 MRNCDVHGIVVGGAAAAVTIIVIVCFVYSYSLKFALSTHFDSDTVSSALSDSQEQHNSGGIHSVVNSCNSLQESNHYLHRPVSSVDHLEHGLHLSTRSFFPQDASYDHETRHALLELETALMAPDGEDQVTTSSTSLGDSSRPTTSDQRNRSWSHEGQSSFDQLIEKTRSAVSITGEPIQRLGAYLVEGLVARKEASGNNIYHALRCIEPEGKDLLSYMQLLYEICPYLKFSYMATNGDIAEACRNEDLIHIIDFQIGQGTQWMTLLQALAAGPGGAPHVRITGIDDQLSKYVRGDGLEAVGKRLAAISQTFNIPVEFHGVPVLAPDVTKDMLDVRPGEALAVNFPLQLHHTADESVDMSNPRDGLLRLVKSLTPKVTTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDVSLPRKSKERVNVEQHCLARDIVNIIACEGKERVERHELLGKWKSRLTMAGFRQYPLSSYVNSVIRSLLRCYSEHYNLVEKDGAMLLGWKD 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02422 502 Pfam GRAS domain family 159 502 IPR005202 -
Gma06g02422 502 MobiDBLite consensus disorder prediction 126 161 - -
Gma06g02422 502 ProSiteProfiles GRAS family profile. 131 502 IPR005202 -
Gma06g02422 502 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 34 160 IPR005202 -
Gma06g02422 502 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 160 502 IPR005202 -
Gma06g02422 502 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 34 160 - -
Gma06g02422 502 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 160 502 - -
Gma06g02422 502 MobiDBLite consensus disorder prediction 124 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02422 Gma-Chr6 46423583 46425615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02422 108 500 GRAS Transcription Factor Family AT5G48150 56.553 1.73e-163 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma06g02422 GRAS 1.7e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02422 - - gmx:100775665 883.248