Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02419 atggcttctaacaccatcatccaatacagctcttcttcatctcattcgatcatcactacatatgacgtgtttgtcagcttctgtggtgaagacacgcgcaacaacttcactgcttttctctttgatgctctctctcaaaattgcatcaatgccttcaaagatgatgcagatctcaagaaaggcgaatccatagcacctgagctgctacaggccattgaagggtctcgccttttcgttgtggtcttctcaaagaactatgcttcctcaacttggtgcttgcgtgaacttgcacacatctgcaactgcactattgaagcatcctcgagtcgtgttcttccaattttctatgatgttgatccatcagaggtgcggaaacagagtggttattatgggatagcctttgaagaacacgaaggaagattcagagaagatatagagaagatggaggaagtactgagatggagagaagctctgacacaagtggccaatctctctggctgggatatccgaaataagtcacaacctgcaatgattaaagaaattgttcaaaacataaaatatatattgggtcccaaatttcaaaatcctccaaatggtaatctagttGGTATGGAATCCAGTGTTGAAGAATTAGAAAAGTGTTTAGTATTGGAGTCGGTTAGTGACGTTCGGGTTGTCGGAATTAGTGGAATGGGAGGAATAGGAAAGACAACTCTTGCCCGTGCTTTATACGAAAAGATTGCTGATCAATATGATTTTCATTGTTTTGTTGATGATGTAAATAATATTTATCGACATTCTAGTTCACTAGGTGTACAAAAACAGTTACTTTCTCAGTGCCTAAATGATGAAAATCtagagatttgcaatgtttctaagggaacatatttggtatcgactatgctacgcaataaaagaggacttatagttcttgataatgttggtcaggttgaacaattacatatgtttacacggagtagagagactctattacgtgaatgtctaggtggagggagtagaatcatcataacttctagggatgaacacatattaaggacacatggagtaaatcatgtttaccaagtccaaccattgagttgggacaatgctgttaagttattttgcataaatgctttcaaatgtacctacattatgagtgattatgaaatgttgacacatggtgtactatcacatgctcaaggccatcccttggcaattgaagtaataggcaaatctttgtttggtcgaaatgtttcacagtggacaagtacattggataggctaagagataataaaagtagaaatattatggatgtgctgcgaataagttatgatgatctagaagaaaaagaTAGGGAAATATTTCTTGATATTGCTTGTTTCTTCAATGATGATCATGAGCAACATGTGAAGGAAATCCTAAATTTTCGTGGATTTGATCCTGAAATTGGCCTACCAATTCTTGTTGAAAAATCACTCATAACCATTAGTGATGGCTTGATTCATATGCATGACTTGCTGAGAGATTTAGGCAAGTGTATTGTTAGAGAAAAATCACCTAAAGAGCCAAGAAAGTGGAGTAGATTGTGGGATTTTGAAGATATCTACAAAGTTATGTCAGACAATATTGAAGCAAAAAATCTTGAAGCCATAGTTGTTAAATATATTTCGTGGAGGGTTCTAGGAACAACAATGAGAGTTGATGCTCTATCTAAAATGAGAAACCTTAAGTTGCTTATGTTTCCCATTGCTTGGACATTTTCAGGAAACCTCAATTATCTTTCCAATGAATTAGGATATCTTTATTGGAAACGATATCCCTTTAACTTGCTGCCTCCATGTTTTCAGCCACACAAACTTGTTGAGTTGAATTTTTGTGGGAGTAAAATCAAACAATTATGGGAAGGCAGAAAGGTAGTAAAGCTTACTATTTTAAATTTGAAAGAGTGCAGAAGTCTCACTGACTTGCCACATTTTGTACAGGGCCTAAATCTTGAAGAGTTAAATCTGGAAGGATGTGTACAACTAAGGCAGATACATCCATCCATTGGTCACCTAAGAAAGCTTACTGTTTTAAATTTGAAAGATTGCATAAGTCTCGTAAGCATACCCAACACCATATTGGGACTCAATTCTCTTGAATGCCCAAGTCTTTCCGGCTGTTCAAAACTATATAATATCCATTTATCAGAAGAACTAAGGGATGCAAGGTATTTGAAGAAGCTTCGTATGGGTGAAGCTCCCAGTTGCTCCCAATCAATATTCTCATTCCTCAAAAAGTGGCTTCCATGGCCTTCTATGGCCTTCGACAAAAGCCTGGAGGATGCACATAAAGATTCAGTTAGATGTTTGTTGCCTTCCTTGCCTATTTTATCATGTATGCGTGAACTTGATCTAAGTTTCTGCAATTTACTTAAAATCCCTGATGCTTTTGGAAATTTGCATTGCTTAGAAAAGCTATGTTTAAGGGGAAACAATTTTGAAACACTACCCAGCCTCAAGGAGCTTTCCAAACTGTTACATTTAAACTTACAACACTGCAAGAGATTGAAATATTTGCCTGAGCTCCCTTCACGAACTGATGTCCCATCACCATCAAGTAACAAGCTGCGGTGGACAAGTGTTGAAAATGAGGAAATAGTATTGGGATTAAATATTTTCAACTGCCCAGAATTAGTTGAGAGGGATTGCTGCACCAGCATGTGTTTGTCATGGATGATGCAAATGGTTCAGGCATTCAGTAAACCTAAGAGCCCGTGGTGGATTCCATTCATTTCAAGTATTATTCCAGGAAGTAAAATACCAAGGTGGTTCGACGAACAGCATTTGGGCATGGGCAATGTCATAAAGATAGAACACGCATCTGATCACTTTATGCAGCATCACAATAATTGGATAGGCATTGCGTGTAGTGTAATATTCGTGCCACACAAAGAAAGAACAATGCGCCATCCTGAAAGTTTCACTGATGAATCGGATGAACGTCCATGTTTTTATATTCCGCTTCTTTTCCGTAAAGATCTAGTCACGGATGAATCGGATCACATGATGCTATTCTATTACACACGAGAAAGTTTCACTTTTCTTACTTCGTTCGAACATCGTgatgagttgaaagtggtatgtgcatccagtgatcctgatcaatattttgatgttgaggtgaagaaatatgggtatcgtagagtatatagacatgatctagaattatcaaacttaacaacgatgcaccgcaaaaatttgctgcctcggaaacgcaaatttttggcaattgaagaaaacaagtag 3288 0.2299 MASNTIIQYSSSSSHSIITTYDVFVSFCGEDTRNNFTAFLFDALSQNCINAFKDDADLKKGESIAPELLQAIEGSRLFVVVFSKNYASSTWCLRELAHICNCTIEASSSRVLPIFYDVDPSEVRKQSGYYGIAFEEHEGRFREDIEKMEEVLRWREALTQVANLSGWDIRNKSQPAMIKEIVQNIKYILGPKFQNPPNGNLVGMESSVEELEKCLVLESVSDVRVVGISGMGGIGKTTLARALYEKIADQYDFHCFVDDVNNIYRHSSSLGVQKQLLSQCLNDENLEICNVSKGTYLVSTMLRNKRGLIVLDNVGQVEQLHMFTRSRETLLRECLGGGSRIIITSRDEHILRTHGVNHVYQVQPLSWDNAVKLFCINAFKCTYIMSDYEMLTHGVLSHAQGHPLAIEVIGKSLFGRNVSQWTSTLDRLRDNKSRNIMDVLRISYDDLEEKDREIFLDIACFFNDDHEQHVKEILNFRGFDPEIGLPILVEKSLITISDGLIHMHDLLRDLGKCIVREKSPKEPRKWSRLWDFEDIYKVMSDNIEAKNLEAIVVKYISWRVLGTTMRVDALSKMRNLKLLMFPIAWTFSGNLNYLSNELGYLYWKRYPFNLLPPCFQPHKLVELNFCGSKIKQLWEGRKVVKLTILNLKECRSLTDLPHFVQGLNLEELNLEGCVQLRQIHPSIGHLRKLTVLNLKDCISLVSIPNTILGLNSLECPSLSGCSKLYNIHLSEELRDARYLKKLRMGEAPSCSQSIFSFLKKWLPWPSMAFDKSLEDAHKDSVRCLLPSLPILSCMRELDLSFCNLLKIPDAFGNLHCLEKLCLRGNNFETLPSLKELSKLLHLNLQHCKRLKYLPELPSRTDVPSPSSNKLRWTSVENEEIVLGLNIFNCPELVERDCCTSMCLSWMMQMVQAFSKPKSPWWIPFISSIIPGSKIPRWFDEQHLGMGNVIKIEHASDHFMQHHNNWIGIACSVIFVPHKERTMRHPESFTDESDERPCFYIPLLFRKDLVTDESDHMMLFYYTRESFTFLTSFEHRDELKVVCASSDPDQYFDVEVKKYGYRRVYRHDLELSNLTTMHRKNLLPRKRKFLAIEENK 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02419 1095 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 914 IPR044974 GO:0006952
Gma06g02419 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 458 IPR027417 -
Gma06g02419 1095 SUPERFAMILY L domain-like 503 856 - -
Gma06g02419 1095 SMART till_3 20 164 IPR000157 GO:0007165
Gma06g02419 1095 Gene3D - 365 448 IPR042197 -
Gma06g02419 1095 Gene3D - 191 358 IPR027417 -
Gma06g02419 1095 PRINTS Disease resistance protein signature 301 315 - -
Gma06g02419 1095 PRINTS Disease resistance protein signature 684 700 - -
Gma06g02419 1095 PRINTS Disease resistance protein signature 399 413 - -
Gma06g02419 1095 PRINTS Disease resistance protein signature 225 240 - -
Gma06g02419 1095 Pfam NB-ARC domain 205 438 IPR002182 GO:0043531
Gma06g02419 1095 Gene3D Ribonuclease Inhibitor 534 766 IPR032675 -
Gma06g02419 1095 Pfam TIR domain 21 195 IPR000157 GO:0007165
Gma06g02419 1095 Gene3D - 18 190 IPR035897 -
Gma06g02419 1095 Gene3D Ribonuclease Inhibitor 773 883 IPR032675 -
Gma06g02419 1095 ProSiteProfiles TIR domain profile. 19 189 IPR000157 GO:0007165
Gma06g02419 1095 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 167 IPR035897 -
Gma06g02419 1095 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 18 914 - -
Gma06g02419 1095 ProSiteProfiles Leucine-rich repeat profile. 816 837 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02419 Gma-Chr6 46337005 46343404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02419 21 883 WRKY Transcription Factor Family AT4G12020 28.956 2.99e-78 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02419 - - gmx:100814717 2051.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02419 06 46337005 46343404 Gma06g02419 06 46337005 46343404 ECH