Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02408 ATGAGTTCGATACCTTATATACTGTTTGTCTCTTCTCTTGTAGTTTCCATAGCAGCAGACACATCATCCATTTCACAATCCCAATCCCTCAGTTTCGGAAAAACCATAGTTTCCCCAAGTGGAACCTTTGAACTTGGTTTCTTCCATCTTGGAAATCCAAACAAAAGCTACCTCGGGATTTGGTTCAAGAATATTCCGTCGCGAGACATTGTTTGGGTTGCAAACGGTGGCAACCCAATCAACAATTCCTCTGCCCTCTTGAGCCTAAAAAGTTCTGGCCACTTGGTCCTTACACACAATAACACTGTAGTTTGGTCCACAAGTTCTCTAAAAGAAGCAATAAATCCAGTGGCAAATCTCTTGGATTCTGGCAATCTTGTGATAAGGGATGAGAATGCAGCAAATCAAGAGGCATATCTGTGGCAAAGCTTTGATTACCCTTCTGATACAATGGTGTCAGGAATGAAGATTGGATGGGACCTCAAAAGAAATCTCAGTATTCACCTTTCAGCTTGGAAGAGTGCTGATGATCCAACCCCAGGAGACTTCACTTGGGGTATTATTCTGCACCCTTATCCTGAAATGTATTTGATGAAGGGAAACAAAAAGTACCAGAGAGTCGGACCATGGAATGGTTTGCAGTTCAGTGGCGGCAGGCCGAAAATTAACAATCCCGTTTACCTTTACAAGTTTGTCTCCAACAAGGAAGAGATTTATTACGAATGGACTCTCAAGAATGCTAGTTTACTATCAAAATTGGTAGTTAACCAAACCGCACAAGATCGTTCTCGTTATGTATGGTCAGAGACGACTAAATCATGGTGGTTTTATTCAACAAGGCCGGAAGACCCTTGTGATCATTATGGGATTTGTGGAGCCAATGAATATTGCAGCCCTAGTGTATTACCAATGTGTGAGTGCTTAAAAGGGTACAAGCCTGAGTCTCCTGAAAAATGGAACTCAATGGACAGGACCCAAGGATGTGTCCTCAAACATCCATTGAGTTGCAAGGATGATGGGTTTGCTCCATTGGACTGGTTGAAAGTTCCTGATACTAAAAGAACATATGTGGATGAGAGTATTGATCTAGAGCAATGCAAAACCAAGTGCTTGAAAGATTGTTCTTGTATGGCATATACAAATACAAATATAAGTGGAGCAGGCAGTGGTTGTGTCATGTGGTTTGGTGAGTTATTTGACATCAAACTGTTTCCAGATCACGAAAGTGGGCAGCGTCTATATATAAGGTTGCCTCCTTCAGAATTAGagtctaactggcacaagaagatctctaaaatagtaaatataataaccttcgttgctgcaactttaggcggtatccttgcaatttttttcatctacagaaggaacgttgctgATAAGTCAAAGACAAAAGAAAGCATTGAAAGACAACTAGAAGATGTGGATGTGCCTTTGTTCAATCTGCTAACCATCACCATTGCCACTAACAATTTCTTATTGAAAAATAAGATTGGACAAGGTGGCTTTGGACCTGTATATAAGGGAAAATTAGAAGGTGGGCAAGAAATTGCTGTGAAGAGGCTTTCAAGTAGGTCTGGACAAGGATTAACAGAGTTCATAACAGAAGTAAAACTGATTGCAAAGCTTCAACACCGGAATCTTGTAAAGCTCCTTGGCTGTTGCATTAAAGGAAAAGAAAAATTACTAGTATATGAATACATGGTTAATGGAAGCCTGGACTCCTTCATATTTGATAAAATAAAAAGTAAATTACTGGATTGGCCTCAACGCTTCCACATAATACTTGGAATTGTTAGGGGGCTTTTGTATCTTCATCAAGATTCTCGATTAAGGATTATTCATAGAGATCTCAAAGCAAGTAACATTTTACTCGATGAAAAGTTAAATCCAAAAATATCAGATTTTGGCTTGGCAAGAGCTTTCGGAGGAGACCAAACAGAAGGAAACACAGATAGAGTAGTTGGGACTTATGGATACATGGCCCCGGAGTATGCTGTTGATGGGCAATTTTCAATCAAATCTGATGTTTTCAGCTTTGGAATTTTGTTGTTGGAGATTGTATGTGGAAACAAAAATAAAGCTCTTTGTCACGAAAACCAAACTCTTAATCTTGTTGGTCATGCATGGACACTTTGGAAAGAGCAAAATGCTTTACAACTTATTGACTCGAGCATAAAGGACTCGTGTGTTATCTCAGAAGTACTGCGATGCATCCATGTTAGTCTCTTGTGTGTGCAACAATACCCGGAGGATAGGCCAACCATGACTTCAGTAATTCAAATGTTAGGGAGTGAGATGGATATGGTTGAGCCAAAAGAACCTGGTTTCTTTCCAAGGAGAATTTTGAAAGAAGGAAATCTATGCACAAATCTAAACCAAGTGACTTCAAACGATGAATTATCCATTACGTCATTAAGTGGTCGATGA 2430 0.3802 MSSIPYILFVSSLVVSIAADTSSISQSQSLSFGKTIVSPSGTFELGFFHLGNPNKSYLGIWFKNIPSRDIVWVANGGNPINNSSALLSLKSSGHLVLTHNNTVVWSTSSLKEAINPVANLLDSGNLVIRDENAANQEAYLWQSFDYPSDTMVSGMKIGWDLKRNLSIHLSAWKSADDPTPGDFTWGIILHPYPEMYLMKGNKKYQRVGPWNGLQFSGGRPKINNPVYLYKFVSNKEEIYYEWTLKNASLLSKLVVNQTAQDRSRYVWSETTKSWWFYSTRPEDPCDHYGICGANEYCSPSVLPMCECLKGYKPESPEKWNSMDRTQGCVLKHPLSCKDDGFAPLDWLKVPDTKRTYVDESIDLEQCKTKCLKDCSCMAYTNTNISGAGSGCVMWFGELFDIKLFPDHESGQRLYIRLPPSELESNWHKKISKIVNIITFVAATLGGILAIFFIYRRNVADKSKTKESIERQLEDVDVPLFNLLTITIATNNFLLKNKIGQGGFGPVYKGKLEGGQEIAVKRLSSRSGQGLTEFITEVKLIAKLQHRNLVKLLGCCIKGKEKLLVYEYMVNGSLDSFIFDKIKSKLLDWPQRFHIILGIVRGLLYLHQDSRLRIIHRDLKASNILLDEKLNPKISDFGLARAFGGDQTEGNTDRVVGTYGYMAPEYAVDGQFSIKSDVFSFGILLLEIVCGNKNKALCHENQTLNLVGHAWTLWKEQNALQLIDSSIKDSCVISEVLRCIHVSLLCVQQYPEDRPTMTSVIQMLGSEMDMVEPKEPGFFPRRILKEGNLCTNLNQVTSNDELSITSLSGR 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02408 809 SMART serkin_6 492 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02408 809 CDD STKc_IRAK 498 763 - -
Gma06g02408 809 ProSiteProfiles Bulb-type lectin domain profile. 21 141 IPR001480 -
Gma06g02408 809 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 31 808 - -
Gma06g02408 809 Pfam Protein tyrosine and serine/threonine kinase 494 763 IPR001245 GO:0004672|GO:0006468
Gma06g02408 809 Gene3D Phosphorylase Kinase; domain 1 453 567 - -
Gma06g02408 809 Gene3D - 15 144 IPR036426 -
Gma06g02408 809 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 31 808 - -
Gma06g02408 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 178 IPR036426 -
Gma06g02408 809 Pfam S-locus glycoprotein domain 206 314 IPR000858 GO:0048544
Gma06g02408 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Gma06g02408 809 CDD PAN_AP_plant 332 418 - -
Gma06g02408 809 PIRSF SRK 1 809 IPR024171 GO:0004674
Gma06g02408 809 ProSiteProfiles PAN/Apple domain profile. 336 418 IPR003609 -
Gma06g02408 809 SMART blect_4 27 147 IPR001480 -
Gma06g02408 809 Gene3D Transferase(Phosphotransferase) domain 1 568 774 - -
Gma06g02408 809 ProSiteProfiles Protein kinase domain profile. 492 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02408 809 Pfam D-mannose binding lectin 70 173 IPR001480 -
Gma06g02408 809 SMART ntp_6 336 417 IPR003609 -
Gma06g02408 809 Pfam PAN-like domain 336 401 IPR003609 -
Gma06g02408 809 CDD B_lectin 33 147 IPR001480 -
Gma06g02408 809 SUPERFAMILY Protein kinase-like (PK-like) 471 763 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02408 Gma-Chr6 46168317 46179894 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02408 419 777 Receptor kinase-like Gene Family AT4G23230 52.632 4.15e-121 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma06g02408 PK_Tyr_Ser-Thr 1.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02408 - - gmx:100812022 1605.11