Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02406 ATGCATCTATCCTTATCTCTTACTACTAAGTTATCTCTTACTACTGCGTTGATCCCAGTGCCTTTACACATAATACTTGGAATTGTTAGGGGGCTTGTGTATCTTCATCAAGATTCTCGATTAAGGATTATTCATAGAGATCTCAAAGCAAGTAACATTTTACTCGATGAAAAGTTAAATCCAAAAATATCAGATTTTGACTTGGCAAGAGCTTTCGGAGGAGACCAAACTAAAGGAAACATAGATAGAATAGTTGGGACTTATGGATACATGGCTCCGGAGTATGCTGTTGATGGGCAATTTTCAATCAAATCTGATGTTTTCAGCTTTGGCATTTTGTTGTTGGAGATTGTATGTGGAAACCAAAATAAAGCTCTTAGTCACGAAAACCAAGCTCTTAATATTGTTGGTTATGCATGGACACTTTGGAAAGAGCAAAATGCTTTACAACTTATTGACTCGAGCATAAAGGACTCATGTGTTATCTCAGAAGTACTGCTATGCATCCATGTTAGTCTCTTGTGTGTGCAACAATACCCGGAGGATAGGCCAACCATGACTTCAGTAATTCAAATGTTAGGGAGTGAGATGGATATGGTTGAGCCAAAAGAACCTGGTTTCTTTCCAAGGAGAATTTTGAAAGAAGGAAATCTATGCACAAATCTAAACCAAGTGACTTCAAACGATGAATTATCCATTACCTCATTAAGTGGTCGATGA 720 0.375 MHLSLSLTTKLSLTTALIPVPLHIILGIVRGLVYLHQDSRLRIIHRDLKASNILLDEKLNPKISDFDLARAFGGDQTKGNIDRIVGTYGYMAPEYAVDGQFSIKSDVFSFGILLLEIVCGNQNKALSHENQALNIVGYAWTLWKEQNALQLIDSSIKDSCVISEVLLCIHVSLLCVQQYPEDRPTMTSVIQMLGSEMDMVEPKEPGFFPRRILKEGNLCTNLNQVTSNDELSITSLSGR 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02406 239 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 238 - -
Gma06g02406 239 Pfam Protein kinase domain 23 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02406 239 SUPERFAMILY Protein kinase-like (PK-like) 22 193 IPR011009 -
Gma06g02406 239 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 22 238 - -
Gma06g02406 239 SMART serkin_6 2 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02406 239 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Gma06g02406 239 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02406 239 Gene3D Transferase(Phosphotransferase) domain 1 7 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02406 Gma-Chr6 46126139 46127045 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02406 23 234 Receptor kinase-like Gene Family AT4G23150 53.991 6.24e-76 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma06g02406 Pkinase 1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02406 - - gmx:113001893 420.239