Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02405 ATGAAGTTTATTCTTACTCTGACGAGTTTCATACTTTATATACTGTTTGTCTCTTCTCTTGTAGTTTCCATAGCAGCAGACACATCATCCATTTCACAATCCCAATCCCTCAGTTTTGGAAGAACCATAGTTTCTCCAAATGGAGTCTTTGAACTTGGATTCTTCAATCTTGGAAATCCAAACAAAAGCTACCTCGGGATTTGGTTCAAGAATATTCCGTCTCAAAACATTGTTTGGGTTGCAAACGGTGGCAACCCAATTAATGATTCCTTTGCCATCTTGAGCCTAAACAGTTCTGGCCATTTGGTCCTTACACACAACAACACTGTTGTTTGGTCCACAAGTTCTCTAAGAGAAACACAGAATCCAGTGGCAAAGCTCTTGGATTCTGGGAATCTTGTGATAAGGGATGAAAATGAAGTGAATCAAGAGGCATATCTGTGGCAAAGTTTTGATTATCCTTCTAATACAGGGTTATCAGGAATGAAGATTGGATGGTACCTCAAACGAAATCTCAGTATTCACCTTACAGCTTGGAAGAGTGATGATGATCCAACCCCGGGAGACTTCACTTGGGGTATTGTTCTGCACCCTTATCCTGAAATCTATTTGATGAAGGGAACCAAAAAGTACTACAGAGTCGGACCATGGAATGGTTTGAGTTTCGGTAATGGCAGTCCAGAACTTAACAATTCAATTTACTATCACGAGTTTGTCTCTGACGAGGAAGAAGTTTCTTACACGTGGAACCTGAAGAATGCAAGCTTTTTATCCAAAGTGGTAGTTAACCAAACCACAGAAGAACGTCCTCGTTATGTATGGTCAGAGACAGAGTCATGGATGCTTTATTCAACTAGGCCTGAAGACTATTGTGACCATTATGGGGTTTGTGGAGCCAATGCATATTGCAGCACTACTGCATCACCAATCTGTGAGTGTTTAAAAGGGTACACGCCTAAGTCTCCTGAAAAATGGCAATCAATGGACAGGACCCAAGGATGTGTCCTCAAACATCCATTGAGTTGCAAGTATGATGGTTTTGCCCAGGTTGATGACTTGAAAGTGCCTGATACTAAAAGAACACATGTGGATCAGACTCTTGATATAGAGCAATGCAGAACCAAGTGCTTGAATGATTGTTCCTGTATGGCATATACCAATTCTAATATAAGTGGAGCTGGAAGTGGCTGTGTCATGTGGTTTGGTGATTTATTAGACATCAAATTGTATTCTGTTGCAGAAAGTGGGCGGCGTCTACATATAAGGTTGCCTCCTTCTGAATTAGaatctatcaagagcaagaagagctccaaaataattattggaacctccgttgctgcagctttaggagttgtacttgctatttgtttcatctacagaaggaacattgccgATAAGTCAAAGACAAAAAAGAGCATTGACAGACAACTACAAGACGTGGATGTGGCATTGTTTGATATGCTAACAATCACTGCTGCCACTGACAATTTTTTATTGAACAATAAAATTGGAGAAGGTGGCTTTGGACCTGTTTATAAGGGAAAATTAGTGGGTGGGCAAGAAATTGCTGTGAAGAGGCTTTCAAGTTTGTCTGGACAAGGAATAACCGAATTCATAACAGAAGTAAAACTGATTGCAAAGCTTCAACACAGAAATCTTGTAAAGCTCCTTGGCTGTTGCATTAAAGGACAAGAAAAATTACTAGTATATGAATACGTGGTTAATGGCAGCCTAAACTCCTTCATATTTGATCAAATAAAAAGTAAATTATTGGATTGGCCACGACGCTTCAACATAATACTTGGAATTGCAAGGGGGCTATTGTATCTTCATCAAGATTCTCGATTAAGGATTATTCATAGAGATCTCAAAGCAAGTAATGTTCTACTAGATGAAAAGTTAAATCCAAAAATATCAGATTTTGGAATGGCAAGAGCTTTTGGAGGAGACCAAACTGAAGGAAACACAAATAGAGTAGTTGGGACTTATGGATACATGGCCCCGGAGTATGCATTTGATGGGAATTTTTCAATCAAGTCTGATGTTTTCAGCTTTGGTATATTGTTGTTGGAGATTGTATGTGGAATAAAAAATAAATCTCTTTGTCACGAAAACCTAACTCTTAACCTTGTTGGTTACGCATGGGCACTTTGGAAAGAGCAAAATGCTTTACAGCTGATTGACTCAGGCATAAAGGACTCATGTGTTATCCCAGAAGTACTGCGATGCATCCATGTTAGTCTCTTGTGTGTGCAACAATACCCGGAGGATAGGCCAACCATGACTTCAGTAATTCAAATGTTAGGGAGTGAAATGGATATGGTTGAGCCAAAAGAGCCTGGTTTCTTTCCAAGGAGGATTTTGAAAGAAGGAAATCTAAAGGAAATGACTTCAAATGATGAATTAACCATTAGCTTATTTAGTGGTCGGTGA 2433 0.3765 MKFILTLTSFILYILFVSSLVVSIAADTSSISQSQSLSFGRTIVSPNGVFELGFFNLGNPNKSYLGIWFKNIPSQNIVWVANGGNPINDSFAILSLNSSGHLVLTHNNTVVWSTSSLRETQNPVAKLLDSGNLVIRDENEVNQEAYLWQSFDYPSNTGLSGMKIGWYLKRNLSIHLTAWKSDDDPTPGDFTWGIVLHPYPEIYLMKGTKKYYRVGPWNGLSFGNGSPELNNSIYYHEFVSDEEEVSYTWNLKNASFLSKVVVNQTTEERPRYVWSETESWMLYSTRPEDYCDHYGVCGANAYCSTTASPICECLKGYTPKSPEKWQSMDRTQGCVLKHPLSCKYDGFAQVDDLKVPDTKRTHVDQTLDIEQCRTKCLNDCSCMAYTNSNISGAGSGCVMWFGDLLDIKLYSVAESGRRLHIRLPPSELESIKSKKSSKIIIGTSVAAALGVVLAICFIYRRNIADKSKTKKSIDRQLQDVDVALFDMLTITAATDNFLLNNKIGEGGFGPVYKGKLVGGQEIAVKRLSSLSGQGITEFITEVKLIAKLQHRNLVKLLGCCIKGQEKLLVYEYVVNGSLNSFIFDQIKSKLLDWPRRFNIILGIARGLLYLHQDSRLRIIHRDLKASNVLLDEKLNPKISDFGMARAFGGDQTEGNTNRVVGTYGYMAPEYAFDGNFSIKSDVFSFGILLLEIVCGIKNKSLCHENLTLNLVGYAWALWKEQNALQLIDSGIKDSCVIPEVLRCIHVSLLCVQQYPEDRPTMTSVIQMLGSEMDMVEPKEPGFFPRRILKEGNLKEMTSNDELTISLFSGR 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02405 810 Gene3D Phosphorylase Kinase; domain 1 458 572 - -
Gma06g02405 810 Gene3D - 22 151 IPR036426 -
Gma06g02405 810 Pfam S-locus glycoprotein domain 212 321 IPR000858 GO:0048544
Gma06g02405 810 ProSiteProfiles PAN/Apple domain profile. 342 424 IPR003609 -
Gma06g02405 810 PIRSF SRK 1 810 IPR024171 GO:0004674
Gma06g02405 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Gma06g02405 810 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Gma06g02405 810 CDD B_lectin 40 154 IPR001480 -
Gma06g02405 810 SMART ntp_6 342 423 IPR003609 -
Gma06g02405 810 ProSiteProfiles Protein kinase domain profile. 497 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02405 810 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 37 809 - -
Gma06g02405 810 ProSiteProfiles Bulb-type lectin domain profile. 28 148 IPR001480 -
Gma06g02405 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 185 IPR036426 -
Gma06g02405 810 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 37 809 - -
Gma06g02405 810 SMART blect_4 34 154 IPR001480 -
Gma06g02405 810 Pfam Protein tyrosine and serine/threonine kinase 499 768 IPR001245 GO:0004672|GO:0006468
Gma06g02405 810 Gene3D Transferase(Phosphotransferase) domain 1 573 779 - -
Gma06g02405 810 CDD STKc_IRAK 503 768 - -
Gma06g02405 810 CDD PAN_AP_plant 338 424 - -
Gma06g02405 810 Pfam D-mannose binding lectin 77 180 IPR001480 -
Gma06g02405 810 SUPERFAMILY Protein kinase-like (PK-like) 477 768 IPR011009 -
Gma06g02405 810 SMART serkin_6 497 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02405 810 Pfam PAN-like domain 342 407 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02405 Gma-Chr6 46116173 46122909 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02405 439 792 Receptor kinase-like Gene Family AT4G23190 51.381 6.75e-121 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma06g02405 PK_Tyr_Ser-Thr 5.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02405 - - gmx:100810955 1599.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02405 06 46116173 46122909 Gma06g02405 06 46116173 46122909 ECH
Gma12g01279 12 17651465 17666744 Gma06g02405 06 46116173 46122909 GST