Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02404 ATGAGGTTCGTTCATTTTCTGATGAATATCATAATTTATACACTGTTTGACACTTTTCTCTTAGTTTTCGAAGCAGCAGGAACATCGTCATTCATAGCACAATACCAGTCCCTCAGTTATGGGAAGAGCATAGTTTCTTCCCCACGTGGAACCTATGAGCTTTGTTTCTTTAACCTTGGAAATCCAAACAAAATCTACCTTGGGATTCGGTACAAGAATATTCCAACTCAAAACGTTGTTTGGGTTGCAAACGGTGGCAACCCAATCAATGATTCCTCTACCATCTTGGAACTAAATAGTTCTGGCAACTTGGTCCTTACACACAACAACATGGTTGTTTGGTCCACAAGTTATCGAAAAGCAGCACAGAATCCCGTGGCGGAGCTCTTGGATTCTGGCAACCTAGTGATAAGAGAGAAAAATGAAGCAAAACCAGAAGAGGAAGAATATCTATGGCAAAGTTTTGACTACCCTTCTAACACAATGTTGGCAGGAATGAAGGTTGGATGGGACCTCAAAAGAAATTTTAGTATTCGCCTCGTAGCTTGGAAGAGTTTTGATGATCCAACACCAGGAGACTTATCTTGGGGTGTTACTCTGCACCCCTATCCAGAGTTCTATATGATGAAAGGAACCAAAAAGTATCACAGACTTGGACCGTGGAATGGTTTGCGTTTTAGTGGCAGACCGGAAATGGCAGGTAGTGATCCCATTTACCATTTTGATTTTGTCTCCAACAAGGAAGAGGTTTATTACACCTGGACCCTCAAGCAGACTAATTTGTTATCGAAATTGGTACTTAACCAAACCACACAAGAACGTCCTCGTTATGTATGGTCAGAGACTGAAAAATCATGGATGTTTTATACAACGATGCCGGAAGACTACTGTGACCATTATGGGGTTTGTGGAGCTAATTCATATTGCAGCACTTCTGCATATCCAATGTGTGAGTGTTTAAAAGGGTTCAAGCCTAAGTCCCCGGAAAAATGGAACTCAATGGGCTGGACCGAAGGATGTGTCCTCAAACATCCATTGAGTTGCATGAATGATGGGTTTTTCCTCGTGGAAGGCTTGAAAGTGCCGGATACTAAACATACTTTTGTGGATGAGAGTATTGATCTAGAGCAATGCAAAACCAAGTGCTTGAATGATTGTTCTTGCATGGCATATACCAATTCTAATATAAGTGGAGCAGGCAGTGGCTGTGTCATGTGGTTTGGTGATTTAATTGACATCAAATTGTATCCTGTTCCAGAAAAAGGGCAGGATCTATATATAAGGTTGCCTTCTTCAGAATTAGAGTCTAGCAGGGACAAGAAGGACTCAAAAATAATAATAATTGCAACCTCCATCGGTGCCACTTTAGGAGTTATACTTGCTATTTATTTCGTCTACAGAAGGAACATTGCTGATAAGTCAAAGACAAAAGAGAACATTAAAAGGCAGCTAAAAGATCTGGATGTGCCATTGTTTGATCTGCTAACAATTACTACGGCCACTAACAATTTCTCGTCGAATAATAAGATTGGACAAGGTGGTTTTGGACCTGTATATAAGGGAAAACTTGTGGATGGGAGAGACATTGCCGTCAAGAGACTCTCAAGTGGGTCTGGACAAGGAATAGTGGAGTTCATAACAGAAGTAAAACTGATTGCGAAGCTTCAACACCGAAATCTTGTAAAGCTCCTCGGCTGTAGCTTTCCAAAACAAGAAAAATTACTGTTATATGAATACATGGTTAATGGAAGCCTAGACTCCTTCATTTTTGATCAACAAAAAGGTAAATTGTTGGATTGGCCTCAACGCTTCCACATAATTTTTGGAATTGCTAGGGGACTTTTGTATCTTCATGAAGATTCCCGATTAAGGATTATTCATAGAGATCTCAAAGCAAGTAACGTTTTACTTGATGAGAAGTTAAATCCAAAAATATCAGATTTTGGAATGGCTAGAGCTTTTGGAGGAGACCAAACTGAAGGAAACACAAATAGAGTAGTTGGGACTTACGGATACATGGCTCCAGAATATGCTGTTGATGGGCTATTTTCAATCAAATCGGATGTTTTCAGTTTTGGTATTTTATTGTTAGAGATTATATGTGGGAACAAAAATAGATCTCTTTGTCATGGAAACCAGACTCTTAACCTTGTTGGCTATGCATGGACTCTTTGGAAAGAGCAAAATACTTCACAGTTGATTGACTCAAACATAAAGGACTCATGTGTCATCCCAGAAGTATTACGATGCATCCATGTCAGTCTCTTGTGTGTGCAACAATACCCAGAGGATAGGCCAACCATGACCTCAGTAATTCAAATGTTAGGGAGTGAAATGGAACTGGTTGAGCCAAAAGAGCCTGGTTTCTTTCCAAGGAGGATTTCGGATGAAAGAAATTTAAGCTCAAATCTAAACCAAACGATTTCAAATGATGAAATAACCATTACCACATTAAAAGGCCGCTGA 2466 0.3982 MRFVHFLMNIIIYTLFDTFLLVFEAAGTSSFIAQYQSLSYGKSIVSSPRGTYELCFFNLGNPNKIYLGIRYKNIPTQNVVWVANGGNPINDSSTILELNSSGNLVLTHNNMVVWSTSYRKAAQNPVAELLDSGNLVIREKNEAKPEEEEYLWQSFDYPSNTMLAGMKVGWDLKRNFSIRLVAWKSFDDPTPGDLSWGVTLHPYPEFYMMKGTKKYHRLGPWNGLRFSGRPEMAGSDPIYHFDFVSNKEEVYYTWTLKQTNLLSKLVLNQTTQERPRYVWSETEKSWMFYTTMPEDYCDHYGVCGANSYCSTSAYPMCECLKGFKPKSPEKWNSMGWTEGCVLKHPLSCMNDGFFLVEGLKVPDTKHTFVDESIDLEQCKTKCLNDCSCMAYTNSNISGAGSGCVMWFGDLIDIKLYPVPEKGQDLYIRLPSSELESSRDKKDSKIIIIATSIGATLGVILAIYFVYRRNIADKSKTKENIKRQLKDLDVPLFDLLTITTATNNFSSNNKIGQGGFGPVYKGKLVDGRDIAVKRLSSGSGQGIVEFITEVKLIAKLQHRNLVKLLGCSFPKQEKLLLYEYMVNGSLDSFIFDQQKGKLLDWPQRFHIIFGIARGLLYLHEDSRLRIIHRDLKASNVLLDEKLNPKISDFGMARAFGGDQTEGNTNRVVGTYGYMAPEYAVDGLFSIKSDVFSFGILLLEIICGNKNRSLCHGNQTLNLVGYAWTLWKEQNTSQLIDSNIKDSCVIPEVLRCIHVSLLCVQQYPEDRPTMTSVIQMLGSEMELVEPKEPGFFPRRISDERNLSSNLNQTISNDEITITTLKGR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02404 821 CDD B_lectin 36 158 IPR001480 -
Gma06g02404 821 ProSiteProfiles Protein kinase domain profile. 504 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02404 821 ProSiteProfiles Bulb-type lectin domain profile. 29 150 IPR001480 -
Gma06g02404 821 Pfam PAN-like domain 348 413 IPR003609 -
Gma06g02404 821 CDD STKc_IRAK 510 775 - -
Gma06g02404 821 ProSiteProfiles PAN/Apple domain profile. 348 430 IPR003609 -
Gma06g02404 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 189 IPR036426 -
Gma06g02404 821 PIRSF SRK 1 821 IPR024171 GO:0004674
Gma06g02404 821 SMART serkin_6 504 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02404 821 Pfam Protein tyrosine and serine/threonine kinase 507 775 IPR001245 GO:0004672|GO:0006468
Gma06g02404 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Gma06g02404 821 Gene3D Phosphorylase Kinase; domain 1 465 579 - -
Gma06g02404 821 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 39 820 - -
Gma06g02404 821 SMART ntp_6 348 429 IPR003609 -
Gma06g02404 821 SMART blect_4 35 158 IPR001480 -
Gma06g02404 821 CDD PAN_AP_plant 344 430 - -
Gma06g02404 821 Pfam D-mannose binding lectin 79 184 IPR001480 -
Gma06g02404 821 Gene3D Transferase(Phosphotransferase) domain 1 580 785 - -
Gma06g02404 821 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 39 820 - -
Gma06g02404 821 Pfam S-locus glycoprotein domain 217 327 IPR000858 GO:0048544
Gma06g02404 821 Gene3D - 25 155 IPR036426 -
Gma06g02404 821 SUPERFAMILY Protein kinase-like (PK-like) 485 775 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02404 Gma-Chr6 46090431 46094139 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02404 442 792 Receptor kinase-like Gene Family AT4G23190 51.247 3.64e-119 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma06g02404 PK_Tyr_Ser-Thr 4.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02404 - - gmx:100809353 1645.17