Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02399 ATGTGTGAGTATTGCTGGCTCACAACCTCAAGTTTTCAGCAATTGAACGATATGAACAGaaataagcaacaacatcctgtgattgaagaaattgttcagcagataaaaaatatcttgggttgcaaattttctattcttccatatgattatctagttgggATGGAATCTCATTTTGCTAAATTATCAAAGCTAATATGTCCGGGGCCGGTTAATGATGATGTTCGAGTTGTTGGAATTACTGGGATGGGTGGAATAGGAAAGTCCACTCTTGGTCGAGCTTTATATGAAAGAATCTCTCATCAATTTAATTCTCGTTGTTATATTGATGATGTAAGCAAACTTTATCAAGGTTATGGTACATTAGGTGTACAAAAAGAGTTACTTTCTCAGTCTctaaatgaaagaaatctagagatttgcaatgtatctaatggaacacttctggtatgggagaggttatccaatgcaaaggcacttatagttcttgacaatgttgatcaacataaacaacttgatatgtttacagggggtagaaatgatctgttaggtaaatgcctaggtaaagggagcatagtcattataatttctagggatcaacaaatattgaaggcacatggagtagatgttatttaccgagtagagccattgaatgacaatgatgctcttcgattgttttgcaaaaaagcattcaaaaataattgtatgatgagtgattttgaaaagttgacttatcatgtactttcacattgtaaaggtcatcccttagcaattgaagtactgggctcatctttgtttggtaaagatgtctctcattgggggagtgcattggtttcgttaagagaaaaaaaaagtaaaagtattatggatgtattgcgaataagttttgatcaattagaggatacacacaaggaaatatttttagatattgcatgtttcttcaaccattttgttgtgaaatttgtgaaggaagttctagattttcgtggatttaatcccgaatatggcctacaagttctcgttgataaatcactcataaccatggattcgaggcagattcaaatgcatgacttgttgtgcgatttgggcaagtatattgttagagaaaaatcacctaggaaaccatggaagtggagcaggttgtgggatgttaaagatttccttaaagttatgtcagataataagAAAACACAGGAAGATGAGACCTTGAAGACACCGATACAAAAGCCAGCTGACATGGAAAAACCAAAATCAATAACTATTGTGCAAAGGACAAACAACATAGAAGATGATGAAGACATGCCTTGGATAGAGGTGAGGAAAAAAGATAAGGATAAGACCAAGG 1342 0.1267 MCEYCWLTTSSFQQLNDMNRNKQQHPVIEEIVQQIKNILGCKFSILPYDYLVGMESHFAKLSKLICPGPVNDDVRVVGITGMGGIGKSTLGRALYERISHQFNSRCYIDDVSKLYQGYGTLGVQKELLSQSLNERNLEICNVSNGTLLVWERLSNAKALIVLDNVDQHKQLDMFTGGRNDLLGKCLGKGSIVIIISRDQQILKAHGVDVIYRVEPLNDNDALRLFCKKAFKNNCMMSDFEKLTYHVLSHCKGHPLAIEVLGSSLFGKDVSHWGSALVSLREKKSKSIMDVLRISFDQLEDTHKEIFLDIACFFNHFVVKFVKEVLDFRGFNPEYGLQVLVDKSLITMDSRQIQMHDLLCDLGKYIVREKSPRKPWKWSRLWDVKDFLKVMSDNKKTQEDETLKTPIQKPADMEKPKSITIVQRTNNIEDDEDMPWIEVRKKDKDKTK 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02399 447 PRINTS Disease resistance protein signature 76 91 - -
Gma06g02399 447 PRINTS Disease resistance protein signature 250 264 - -
Gma06g02399 447 PRINTS Disease resistance protein signature 152 166 - -
Gma06g02399 447 Gene3D - 46 210 IPR027417 -
Gma06g02399 447 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 47 407 - -
Gma06g02399 447 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 407 IPR044974 GO:0006952
Gma06g02399 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 309 IPR027417 -
Gma06g02399 447 Gene3D - 215 299 IPR042197 -
Gma06g02399 447 Pfam NB-ARC domain 72 287 IPR002182 GO:0043531
Gma06g02399 447 SUPERFAMILY "Winged helix" DNA-binding domain 286 389 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02399 Gma-Chr6 45997387 46040810 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02399 52 413 WRKY Transcription Factor Family AT5G45050 33.607 4.90e-56 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02399 - - gmx:100305456 694.501