Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02396 ATGAACCCTAAAATTTCAGATTTTGGTATGGCTAGGACATTTGAGCTAGATCAACATGAAGCAAATACAACTAGAATAATGGGAACATATGGTTATATGTCTCCTGAATATGCTGTACATGGATCTTTTTCAGTCAAATCTGATGTTTATAGCTTTGGAGTGATAGTGTTGGAGATAATAAATAGGAGAAAGATCAAAGAATTTTGTGACCCACATCATGACCTGAATCTTCTTGGGCATGCATGGAGACTATGGATTCAGCAAAGGCCGATGGAACTTATGGATGACTTAGTGGACAATTCAGCTAGTCCATCTGAAATATTAAGGCATATTCATATTGGTTTGTTATGCGTACAACAAAGACAAGAGGATAGACCAAACATGTCATCAATAGTTTTAATGTTGAATGGTGAAAAGTTGTTGCCTGAGCCAAGTCAACCCGGGTTCTACACGAGAATTGATCATCCACCCATGAGAGAATCTTCTGCAAGAAATCTTGAAGCATTTTCCCTTAGTGAAATGTCTAACTCAGTGTTGGAGGCAAGATAA 549 0.377 MNPKISDFGMARTFELDQHEANTTRIMGTYGYMSPEYAVHGSFSVKSDVYSFGVIVLEIINRRKIKEFCDPHHDLNLLGHAWRLWIQQRPMELMDDLVDNSASPSEILRHIHIGLLCVQQRQEDRPNMSSIVLMLNGEKLLPEPSQPGFYTRIDHPPMRESSARNLEAFSLSEMSNSVLEAR 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02396 182 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 181 - -
Gma06g02396 182 ProSiteProfiles Protein kinase domain profile. 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02396 182 Gene3D Transferase(Phosphotransferase) domain 1 1 142 - -
Gma06g02396 182 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 181 - -
Gma06g02396 182 SUPERFAMILY Protein kinase-like (PK-like) 2 160 IPR011009 -
Gma06g02396 182 Pfam Protein tyrosine and serine/threonine kinase 4 133 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02396 Gma-Chr6 45920413 45921178 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02396 1 152 Receptor kinase-like Gene Family AT4G23150 55.556 5.12e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma06g02396 PK_Tyr_Ser-Thr 1.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02396 - - gmx:100801916 293.508