Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02393 ATGGACATTTTCTCTGTCATGACGATGGTTGCTTGCATGCTTCCCTCTCTCAGAATTTCCGTAGCAAATGATTCTATTAACGTGTCCAAGTCCATGACTGATGGGGAGAGCTTGGTGTCAAAAGGTGGAAAGTTTGAACTAGGGTTTTTCAGCCCTGGTAATTCTCAGAAACGTTACTTGGGAATTTGGTACAAGAATGTCCCAAACCAGACAGTTGTTTGGGTTGCTAATAGGGAAAACCCCATCAATGATTCCTCAGGCATCTTAACACTCAACACCACAGGGAATCTTGTTCTCACCCAAAACAAGTCTCTTGTTTGGTACACAAACAACTCTCACAACCAAGCACAGAATCCGGTGGCAGTGCTCTTGGAAAGTGGCAATCTTGTCATAAGAAATGAGGGAGAAACAAACCCAGAAGCGTATTTGTGGCAAAGCTTTGACTATCCATCTGATACATTCCTGCCAGGAATGAAGTTGGGATGGAATCTCCGAACGGGTCATGAATGGAAACTAACAGCTTGGAAGAGTCCAGATGATCCATCCCCAGGAGACGTTTATCGGGTTTTCAAACTCTATAACTATCCTGAGCTTTATGTAATGAAAAAAACAAAAAAGTTATACCGATTTGGACCTTGGAATGGCTTATATTTTAGCGGAATGTCTGATCTACAGAACAACACCGTGCATAGCTTCTATTATGTCAGCAATAAAGACGAGATATACTACGCGTATAGCCTTGCAAATGATTCTGTCATCGTCAGATCTGTAACAGACCAAACTACAAGTATAGTTTATCGTTATAAATGGGTTGTGGGTGAACAAAATTGGAGGCTATCCAGATCCTTCCCTACAGAGTTTTGTGACACTTATAGCGTCTGCGGAGCCTACGGGAATTGCGTAAGTAGTACTCAACCTCAAGCCTGCAATTGTTTGAAAGGTTTCAGTCCAAATTCTCCACAAGCATGGAAATCTTCGTATTGGAGTGGCGGATGTGTACGCAATAAACCATTGATCTGCAAAGAAAAACTATCAGATGGGTTTGTCAAATTTAAAGGCCTGAAAGTTCCAGATACTACACATACTTGGTTGAATGAGAGTATTGGTCTAGAGGAATGTCGAGTGAAGTGCTTGAGTAATTGTTCTTGTATGGCCTTTGCTAATTCAGATATAAGAGGTGAAGGTAGTGGCTGTGTCATGTGGTTTGGAGATCTCATTGACATGAAACAACTTCAAACTGATGGCCAAGATCTATATATCAGGATGCATGCATCAGAGTTAGCAACCAATTGTTGGAAGGACAAGAGTGAGAAGGATGACAACATTGATTTACAAGCATTTGATTTTCCATCCATTTCTAATGCCACAAATCAATTTTCAGAAAGTAACAAATTAGGACAAGGTGGTTTTGGACCAGTGTACAAGGGCATGTTACCAAATGGGCAAGAGATTGCAGTTAAGAGGCTTTCAAATATTTGTGGACAAGGATTGGACGAGTTCAAAAACGAAGTCATGTTAATTGCAAAACTTCAACACCGTAATCTAGTAACACTCGTTGGTTGTTCTATTCAGCAAGATGAGAAGTTGTTGATTTATGAATTCATGCCAAATAGAAGCTTGGACTACTTTATTTTTGATTCAGCAAGGCGTGCATTATTAGGATGGGCTAAACGACTTGAAATTATTGGTGGAATTGCTCGAGGACTTCTTTATCTTCATCAAGACTCTAAACTAAAGATCATTCACAGGGATCTCAAAACCAGTAATGTTCTACTTGATAGTAATATGAACCCAAAAATATCAGATTTTGGTATGGCTAGGACATTTGAGCTAGATCAAGATGAAGAAAATACGACTAGAATTATGGGAACATACGGTTATATGTCTCCTGAATATGCTGTACATGGATCTTTTTCAGTCAAATCTGATGTTTATAGCTTTGGTGTGATTATATTGGAGATAATCAGCGGGAGAAAGATCAAGGAATTTATTGACCCACATCATGACCTAAATCTTCTTGGGCATGCATGGAGACTTTGGATTCAGCAAAGGCCAATGCAACTTATGGATGACTTAGCGGACAATTCAGCTGGTCTATCTGAAATATTAAGGCATATTCATATTGGTTTGTTATGCGTACAACAAAGACCAGAGGATAGGCCAAATATGTCATCAGTAGTTTTAATGTTGAATGGTGAAAAATTGTTGCCCCAACCAAGTCAACCCGGGTTCTACACAGGAAATAATCATCCACCCATGAGAGAATCTTCTCCAAGAAATCTTGAAGCATTTTCCTTTAGTGAAATGTCTAACTCAGTGTTGGTGGCAAGATAA 2334 0.3963 MDIFSVMTMVACMLPSLRISVANDSINVSKSMTDGESLVSKGGKFELGFFSPGNSQKRYLGIWYKNVPNQTVVWVANRENPINDSSGILTLNTTGNLVLTQNKSLVWYTNNSHNQAQNPVAVLLESGNLVIRNEGETNPEAYLWQSFDYPSDTFLPGMKLGWNLRTGHEWKLTAWKSPDDPSPGDVYRVFKLYNYPELYVMKKTKKLYRFGPWNGLYFSGMSDLQNNTVHSFYYVSNKDEIYYAYSLANDSVIVRSVTDQTTSIVYRYKWVVGEQNWRLSRSFPTEFCDTYSVCGAYGNCVSSTQPQACNCLKGFSPNSPQAWKSSYWSGGCVRNKPLICKEKLSDGFVKFKGLKVPDTTHTWLNESIGLEECRVKCLSNCSCMAFANSDIRGEGSGCVMWFGDLIDMKQLQTDGQDLYIRMHASELATNCWKDKSEKDDNIDLQAFDFPSISNATNQFSESNKLGQGGFGPVYKGMLPNGQEIAVKRLSNICGQGLDEFKNEVMLIAKLQHRNLVTLVGCSIQQDEKLLIYEFMPNRSLDYFIFDSARRALLGWAKRLEIIGGIARGLLYLHQDSKLKIIHRDLKTSNVLLDSNMNPKISDFGMARTFELDQDEENTTRIMGTYGYMSPEYAVHGSFSVKSDVYSFGVIILEIISGRKIKEFIDPHHDLNLLGHAWRLWIQQRPMQLMDDLADNSAGLSEILRHIHIGLLCVQQRPEDRPNMSSVVLMLNGEKLLPQPSQPGFYTGNNHPPMRESSPRNLEAFSFSEMSNSVLVAR 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02393 777 Pfam D-mannose binding lectin 71 176 IPR001480 -
Gma06g02393 777 Pfam PAN-like domain 342 408 IPR003609 -
Gma06g02393 777 Gene3D - 18 147 IPR036426 -
Gma06g02393 777 Pfam S-locus glycoprotein domain 208 318 IPR000858 GO:0048544
Gma06g02393 777 MobiDBLite consensus disorder prediction 740 762 - -
Gma06g02393 777 Gene3D Hepatocyte Growth Factor 340 423 - -
Gma06g02393 777 MobiDBLite consensus disorder prediction 741 762 - -
Gma06g02393 777 SMART blect_4 29 150 IPR001480 -
Gma06g02393 777 PIRSF SRK 428 777 IPR024171 GO:0004674
Gma06g02393 777 PIRSF SRK 1 442 IPR024171 GO:0004674
Gma06g02393 777 ProSiteProfiles PAN/Apple domain profile. 340 424 IPR003609 -
Gma06g02393 777 CDD B_lectin 29 150 IPR001480 -
Gma06g02393 777 Gene3D Phosphorylase Kinase; domain 1 424 534 - -
Gma06g02393 777 Gene3D Transferase(Phosphotransferase) domain 1 535 737 - -
Gma06g02393 777 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 10 428 - -
Gma06g02393 777 ProSitePatterns Serine/Threonine protein kinases active-site signature. 580 592 IPR008271 GO:0004672|GO:0006468
Gma06g02393 777 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Gma06g02393 777 CDD STKc_IRAK 465 732 - -
Gma06g02393 777 Pfam Protein tyrosine and serine/threonine kinase 462 728 IPR001245 GO:0004672|GO:0006468
Gma06g02393 777 PANTHER - 434 765 - -
Gma06g02393 777 PANTHER - 10 428 - -
Gma06g02393 777 SMART ntp_6 343 422 IPR003609 -
Gma06g02393 777 SMART serkin_6 459 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02393 777 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 181 IPR036426 -
Gma06g02393 777 SUPERFAMILY Protein kinase-like (PK-like) 443 730 IPR011009 -
Gma06g02393 777 CDD PAN_AP_plant 337 421 - -
Gma06g02393 777 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 434 765 - -
Gma06g02393 777 ProSiteProfiles Protein kinase domain profile. 459 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02393 Gma-Chr6 45861071 45866142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02393 447 744 Receptor kinase-like Gene Family AT4G23230 59.197 4.03e-124 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma06g02393 PK_Tyr_Ser-Thr 2.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02393 - - gmx:100804557 1362.82