Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02380 ATGGATTCAACGGGGATTCGAATGCATGACTTGTTGTGTGATTTGGGCAAGTATATTGTTAGAGAAAAATCACCTAGGAAGCCATGGAAGTGGAGCAGGTTGTGGGATGTTAAAGATTTCCACAAAGTTATGTCAAATAATAAGGCAGCAGAAAATGTTGAGGCCATAGTTCTTACAGAAAAATCTGACATTCTTGGAACAATTCGAACAATGAGAGTCGATGCTCTATCAACAATGAGTTGCCTTAAGCTTCTCAAACTTGAATATTTGAACTCCGAAATCAATTTTTCAGGAACACTTACTAAGCTTTCCAATGAATTAGGATATCTTAGTTGGAAAAAGTATCCTTTTGAGTGTTTGCCACCAAGTTTTGAGCCGGACAAACTTGTTGAGTTGATACTAAGTGACAGCAACATCAAACAACTTTGGGAATGCACAAAGGTACCTCTACCCAATTTGAGGCGTTTGGATCTCTCTGGCTCCAAAAATCTAATAAAAATGCCATATATTGGAGATGCCCTATATCTTGAGAGTTTTAATCTCGAAGGATGTATACAACTCGAAGAGATCGGTCTGTCCGTTGTTCTTTCACGAAAGCTTTTTTATCTGAATTTGAGAAATTGCAAAAGTCTTATCAAGTTGCCACAGTTTGGAGATGACCTAATTCTTGAAAATTTAGATCTCGAAGGATGTCAAAAACTCAGACGCATTGATCCATCCATCGGTCTTCTAAAAAAGCTCATAAGATTGAATTTGAACAACTGCAAAAATCTAGTAAGCTTACCCAATAGCATACTAGGCCTCAATTCTCTTGTATGGCTGTATCTCTCTGGCTGTTCAAAACTGTACAACACCGAGTTATTATATGAACTAAGGGATGCAGAGCAATTGAAGAAGATTGATATAGATGGAGCTCCTATTCATTTCCAATCAACATCTTCCTACTCCATACAACATCAAAAATCAGTTAGTTGCTCAATGCCTTCCTCCCCAATATTTCCATGGATGCGTGAACTTGATCTAAGTTTCTGTAATTTAGTTGAAATCCCTGATGCCATTGGAATTATGAGTTGCTTAGAAAGGCTAGATTTAAGTGGTAACAATTTTGCTACACTGCCCAACCTCAAGAAGCTTTCCAAACTGGTCTGTTTAAAGTTACAACATTGCAAGCAGTTGAAATCTTTGCCTGAGCTCCCTTCACCAATTCTTCGGCGCCAACGAACAGGATTATACATTTTTAACTGCCCAGAATTAGTTGATAGGGAACACTGCACTGACATGGCTTTTTCATGGATGATGCAATTTTGTTCGCCTAAGGAAATAACTTCATACATTGATGAAAGTGTTAGTCCAGGAAGTGAAATACCAAGGTGGTTCAATAATGAGCATGAGGGAAATTGTGTAAACTTAGACGCATCTCCTGTTATGCATGACCATAATTGGATTGGCGTTGCGTTTTGTGCAATATTCGTCGTACCTCATGAAACACTCTCTGCAATGAGTTTTTCAGAGACAGAATGGAACTACCCTGTTTTTGGTGATATTCCAGTGGATTTTTATGAAGATGTAGATCTAGAACTTGTTTTAGACAAATCAGATCACATGTGGCTATTCTATGTTGATCGACATGACTTCATTGCAGATTTCCATCTCGATGACAAATATCTTGGCAGATTGCTTTTGAAATGTGATGAAGGGATAGGGTTCAAAGAGTCATATGCTGAGGTGAAGAAATACGGATATCGCTGGGTATATAAAGGGGATCTAGAACAAAGGAAGCGCAAATTTGGGGAAATTGAAGAAAAAGTGAGCAGAAGGGAGAAAAGATGA 1830 0.3825 MDSTGIRMHDLLCDLGKYIVREKSPRKPWKWSRLWDVKDFHKVMSNNKAAENVEAIVLTEKSDILGTIRTMRVDALSTMSCLKLLKLEYLNSEINFSGTLTKLSNELGYLSWKKYPFECLPPSFEPDKLVELILSDSNIKQLWECTKVPLPNLRRLDLSGSKNLIKMPYIGDALYLESFNLEGCIQLEEIGLSVVLSRKLFYLNLRNCKSLIKLPQFGDDLILENLDLEGCQKLRRIDPSIGLLKKLIRLNLNNCKNLVSLPNSILGLNSLVWLYLSGCSKLYNTELLYELRDAEQLKKIDIDGAPIHFQSTSSYSIQHQKSVSCSMPSSPIFPWMRELDLSFCNLVEIPDAIGIMSCLERLDLSGNNFATLPNLKKLSKLVCLKLQHCKQLKSLPELPSPILRRQRTGLYIFNCPELVDREHCTDMAFSWMMQFCSPKEITSYIDESVSPGSEIPRWFNNEHEGNCVNLDASPVMHDHNWIGVAFCAIFVVPHETLSAMSFSETEWNYPVFGDIPVDFYEDVDLELVLDKSDHMWLFYVDRHDFIADFHLDDKYLGRLLLKCDEGIGFKESYAEVKKYGYRWVYKGDLEQRKRKFGEIEEKVSRREKR 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02380 609 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 210 277 IPR044974 GO:0006952
Gma06g02380 609 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 317 591 IPR044974 GO:0006952
Gma06g02380 609 ProSitePatterns 'Homeobox' antennapedia-type protein signature. 332 337 IPR001827 GO:0003677|GO:0003700|GO:0006355
Gma06g02380 609 Gene3D Ribonuclease Inhibitor 67 222 IPR032675 -
Gma06g02380 609 Gene3D Ribonuclease Inhibitor 312 461 IPR032675 -
Gma06g02380 609 Gene3D Ribonuclease Inhibitor 223 306 IPR032675 -
Gma06g02380 609 Pfam Leucine Rich Repeat 128 147 IPR011713 -
Gma06g02380 609 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 317 591 - -
Gma06g02380 609 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 210 277 - -
Gma06g02380 609 Pfam C-JID domain 451 590 IPR045344 -
Gma06g02380 609 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 4 211 - -
Gma06g02380 609 ProSiteProfiles Leucine-rich repeat profile. 358 379 IPR001611 GO:0005515
Gma06g02380 609 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 211 IPR044974 GO:0006952
Gma06g02380 609 SUPERFAMILY L domain-like 7 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02380 Gma-Chr6 45479521 45512716 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02380 6 282 WRKY Transcription Factor Family AT4G12020 33.442 3.87e-31 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02380 - - gmx:100305456 974.156