Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02378 ATGCATATTTATTTTAACAGTTGTGCTTTAACATACAAAAAAATGGCCATTCCCCTATCTCTCATGCTAGTCATAGCCATGCTTTTTCTCTTCTCATCCAAAATTTCCTCCGAATCTGACACCCTCACTCAGTTGCAGCCACTTCACGATGGAGCCACCTTGGTTTCCAAAGAAGGAACCTTTGAGTTGGGTTTCTTCAGCCCAGGTAGCTCCACAAACCGCTACCTAGGAATCTGGTTCAAAAACATTCCACTAAAAACCGTCATTTGGGTTGCCAACCGCAACTACCCAATAATCAACAAGAACACCTCCACCTACACCAACACCAACACCAAGTTAACCATAACCAAAGATGGAAACCTCACCCTTCTCACCGCAAACAACACCCATCACTGGTCAACAAATGCAACAACGAAATCAGTGAATGCAGTAGCACAGCTCTTGGATTCAGGCAACTTGATCCTAAGAGAAGAAAAAGACAACACCAATTCTCAAAACTACTTGTGGCAAAGCTTTGACTATCCTTCAGATACACTTTTACCAGGGATGAAGCTTGGATGGGAAGTAACAACAGAGGCTCTTAATCTTAATAGGTATCTCACTGCATGGAACAATTGGGAAGACCCATCTTCTGGTCAATTCGCTTATGGCGTGGCAAGAAGCAGCATCCCCGAAATGCAACTACGGAATGGCTCATCAGTGTTCTACAGAAGTGGCCCTTGGAACGGCTTTCGATTCAGCGCTACACCCATTCCAAAACACCGTTCATTGGTGAATCTTAATTTTGTGGACACCACCAAAGAGAGTTATTATCAGATTTTCCCGAGGAATAGGTCATTGCTTATAAGAACGGTTGTTAACCAAACCGTTTCCACTCTTCAGCGCTTCTTTTGGGATGAAGAAAGCCAAAACTGGAAGCTGGAGTTAGTTATTCCGAGGGATGATTTTTGCAGCTATAACCACTGTGGCTCTTTCGGGTACTGCGCCGTGAAGGATAACTCCTCAGTGTGCGAGTGTTTACCTGGGTTTGAACCAAAATCGCCTTGGACTCAAGGGTGTGTACATAGCAGAAAAACTTGGATGTGTAAGGAGAAAAATAATGACGGTTTCATTAAGATTAGTAACATGAAGGTCCCCGACACAAAAACATCATGCATGAATAGAAGTATGACAATTGAGGAATGCAAGGCAAAGTGCTGGGAAAATTGTTCTTGTACGGCTTATGCTAATTCAGACATCACTGAAAGTGGAAGTAGTTATAGCGGCTGCATCATCTGGTTCGGTGATTTATTAGACTTGAGACAGATTCCAGATGCAGGGCAAGATCTATATGTTAGAATCGATATCTTCAAAGTAGATAAATATGGATCAAAGAAAGTGATGGTTGTTGTCGCAAGCATTGTTTCATCTATTATTGCCATGCTTGTAGTATTGAAGTTTGTTTACTGGAGAAATAAGACCAAATTTAGAAGCGAAGTGATCATCAAGACAAAAGGAAAAACAAATGAGAGTGAAGATGAAGATCTAGAACTACCTTTGTTTGACTTTGACTTTGATACAATAGTATGTGCTACTAGTGATTTCTCAAGTGACAACATGCTTGGCCAGGGTGGTTTTGGTCCTGTATACAGAGGCACATTACCAGACGGGCAGGATATTGCAGTCAAAAGGCTTTCGGATACATCTGTACAAGGACTAAACGAATTTAAGAATGAGGTTATATTATGTTCTAAACTTCAACATCGAAATCTTGTCAAAGTCCTTGGCTATTGCATTGAAGAGCAAGAAAAATTACTCATCTATGAATACATGTCTAACAAAAGCCTAAACTTCTTTCTCTTTGATACTTCTCAAAGCAAACTTCTAGATTGGCCAAGGCGATTAGACATAATAGGCAGTATAGCTCGAGGACTTCTTTATCTTCACCAAGACTCTAGATTGAGGATCATACACAGAGATTTAAAATCAAGTAATATTTTGTTAGATGATGATATGAATCCAAAAATTTCTGATTTTGGATTAGCTCGAATGTGTAGAGGTGATCAGATTGAAGGGACTACAAGAAGAGTTGTTGGTACATATGGTTACATGTCACCTGAATATGCAATTGGTGGAGTGTTCTCCATCAAATCTGATGTCTTTAGCTTCGGTGTTATATTACTAGAGGTTTTAAGTGGAAAGAGAAACAAAGAGTTTTCCTACTCAAGTCAGAACTATAATCTTATTGGACATGCATGGAAGTTGTGGAAAGAAGGCATACCAGGGGAATTGATTGATAATTGTTTGCAGGACTCGTGTATCATATCAGAAGCCTTACGATGCATTCACATTGGTCTTTTATGCCTACAACGTCAACCTAATGATCGGCCAAACATGGCATCTGTAGTTGTTATGCTGAGTAGTGATAATGAATTAACCCAACCAAAGGAACCTGGTTTCTTAATAGATAGGGTTTTAATTGAAGAAGAATCACAATTTAGAAGCCAAACTTCTTCTTCAACCAATGGAGTAACCATTTCAATCCTGGATGCAAGATAA 2538 0.3991 MHIYFNSCALTYKKMAIPLSLMLVIAMLFLFSSKISSESDTLTQLQPLHDGATLVSKEGTFELGFFSPGSSTNRYLGIWFKNIPLKTVIWVANRNYPIINKNTSTYTNTNTKLTITKDGNLTLLTANNTHHWSTNATTKSVNAVAQLLDSGNLILREEKDNTNSQNYLWQSFDYPSDTLLPGMKLGWEVTTEALNLNRYLTAWNNWEDPSSGQFAYGVARSSIPEMQLRNGSSVFYRSGPWNGFRFSATPIPKHRSLVNLNFVDTTKESYYQIFPRNRSLLIRTVVNQTVSTLQRFFWDEESQNWKLELVIPRDDFCSYNHCGSFGYCAVKDNSSVCECLPGFEPKSPWTQGCVHSRKTWMCKEKNNDGFIKISNMKVPDTKTSCMNRSMTIEECKAKCWENCSCTAYANSDITESGSSYSGCIIWFGDLLDLRQIPDAGQDLYVRIDIFKVDKYGSKKVMVVVASIVSSIIAMLVVLKFVYWRNKTKFRSEVIIKTKGKTNESEDEDLELPLFDFDFDTIVCATSDFSSDNMLGQGGFGPVYRGTLPDGQDIAVKRLSDTSVQGLNEFKNEVILCSKLQHRNLVKVLGYCIEEQEKLLIYEYMSNKSLNFFLFDTSQSKLLDWPRRLDIIGSIARGLLYLHQDSRLRIIHRDLKSSNILLDDDMNPKISDFGLARMCRGDQIEGTTRRVVGTYGYMSPEYAIGGVFSIKSDVFSFGVILLEVLSGKRNKEFSYSSQNYNLIGHAWKLWKEGIPGELIDNCLQDSCIISEALRCIHIGLLCLQRQPNDRPNMASVVVMLSSDNELTQPKEPGFLIDRVLIEEESQFRSQTSSSTNGVTISILDAR 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02378 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
Gma06g02378 845 Gene3D Phosphorylase Kinase; domain 1 488 603 - -
Gma06g02378 845 PIRSF SRK 12 845 IPR024171 GO:0004674
Gma06g02378 845 Pfam PAN-like domain 362 433 IPR003609 -
Gma06g02378 845 Pfam D-mannose binding lectin 87 203 IPR001480 -
Gma06g02378 845 ProSiteProfiles Protein kinase domain profile. 528 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02378 845 SUPERFAMILY Protein kinase-like (PK-like) 507 799 IPR011009 -
Gma06g02378 845 Gene3D - 33 172 IPR036426 -
Gma06g02378 845 SMART serkin_6 528 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02378 845 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 28 825 - -
Gma06g02378 845 Pfam S-locus glycoprotein domain 236 347 IPR000858 GO:0048544
Gma06g02378 845 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 28 825 - -
Gma06g02378 845 CDD PAN_AP_plant 362 447 - -
Gma06g02378 845 Pfam Domain of unknown function (DUF3403) 800 845 IPR021820 GO:0004674
Gma06g02378 845 Pfam Protein tyrosine and serine/threonine kinase 531 796 IPR001245 GO:0004672|GO:0006468
Gma06g02378 845 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 242 IPR036426 -
Gma06g02378 845 CDD STKc_IRAK 534 799 - -
Gma06g02378 845 SMART blect_4 45 175 IPR001480 -
Gma06g02378 845 ProSiteProfiles PAN/Apple domain profile. 362 448 IPR003609 -
Gma06g02378 845 CDD B_lectin 46 175 IPR001480 -
Gma06g02378 845 Gene3D Transferase(Phosphotransferase) domain 1 604 811 - -
Gma06g02378 845 SMART ntp_6 365 447 IPR003609 -
Gma06g02378 845 ProSiteProfiles Bulb-type lectin domain profile. 39 168 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02378 Gma-Chr6 45376791 45451063 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02378 503 844 Receptor kinase-like Gene Family AT4G11530 55.362 1.15e-122 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma06g02378 PK_Tyr_Ser-Thr 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02378 - - gmx:100792011 1566.98