Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02371 ATGACCATTCCACTACCGTTCATGCTTGTCATGATCATAGCCAACCTGCTTTTCCTCTCATCCAAAATTTCTTCAGAAACCAACACCATCTCCCAGCTCCAGCCACTCCCCGATGGAACTACCTTGGTTTCCGAAGATGGAACCTTTGAGCTGGGTTTATTCAGCCCAGGTAGTTCCACAAACCGCTACCTAGGAATCTGGTTCAAAACCATCAAACCAAAAACCGTAGTTTGGGTTGCCAACCGCGACAACCCAATCAACAACACCAATTCCACCACTAAGTTAACCATAACAAAAGAAGGAAACCTCGTACTTCTCAACCAAAACAACAACATTATTTGGTCAACAAACACAACAACAAAAGCCACCAACGTTGTAGCACAGCTCTTGGACACAGGCAACTTGGTCCTAAGAGACGAGGAAGACAACAATCCTCCAAAATTCTTGTGGCAGAGCTTCGACCATCCTTCGGATACGCTTTTACCAGGAATGAAACTAGGTTGGGAAAAAGTAACAACAAAGGGTAGTCTTAATCTTAACAGGTACCTCACTGCATGGAACAATTGGGAAGACCCTTCTTCTGGTCACTTCACTTACGGCTTCAGCAGAAGCACCATTCCCGAAAAGCAAATGTGGAACGGGTCGTCGTTGTTCTTCCGAAACGGCCCTTGGAACGGAATTCGCTTCAGCGGCACACCCTCGTTGAAACACCGTCCGTTATTCGGTCTCACTTTCGTGTACAACGCGGACGAGTGCTATTTCCAGTTCTACCCCAAGAACAGTTCGCTAATTTCCAGAATTGTCCTCAACCAAACCGATTACGCTCTTCGGCGTTTCGTGTGGGTCGAGGAAAGTCAAAAGTGGAAGCTGTACATGACTGTTCCCGGAGAATATTGCGACGAGTATAACCACTGTGGCTCTTTTGGGTACTGTGCGATGTTGGGTAAGTTCCCATCGTGCAAGTGTTTGCTTGGATTTGAGCCAAAATCGCCGCAAAACTGGGTCGCAAGTAACTGGAGTCAAGGGTGTGTGCTGAGTAGTAAAAGTTGGAGGTGTAGGGAGAAAGATAAAGATGGTTTTGCATTGTTTAGTAACATGAAGGTTCCAGACACCAACACATCGTGGATTAGTAGATATAGTAATATGACACTTGAGAAATGCAAGGAAAAGTGTTGGGAGAATTGTTCGTGTACGGCTTATGGTAGCTCTGACATCACTGGAAAGGGAAGTGGTTGTATCCTGTGGTTCGGTGATCTATTGGACTTGAGACTGCTTCCTAAAGCAGGGCAAGATATTTACGTTAGAGTGGATATCTCCCAAATAGGTGCAAAAGGTGGTTCTACTTCTAGGAAAGTGCTTGTTGTGGTCACAGGCATTGTTTCATCTATTATTGCTATTCTTGTGATATTCGTGCTCGTTTACTGCAACAAGTTTAGAAGCAAAGATGTCATGAAGACAAAAGTAAAAATAAATGATAGCAATGAAGAAGAATTGGAACTACCTTTGTTTGACTTTGATACAATAGCATTTGCTACTAATGATTTTTCAAGTGACAACAAGCTTGGCCAAGGTGGTTTTGGTCCTGTATATAAAGGCACATTACCAGATGGACAAGATATTGCAGTCAAAAGGCTTTCACAAACATCTACACAAGGATTAACAGAATTTAAGAATGAAGTTATATTTTGTTCAAAACTTCAACATCGAAATCTTGTTAAAGTTCTTGGTTGTTGCATCAATGAGCAGGAGAAATTACTCATCTATGAGTACATGCCGAACAAAAGCCTAGACTTCTTTCTTTTTGATTCTTCTCAAAGCAAACTTTTAGATTGGTCCAAGCGATTGAACATAATAAATGGAATTGCTCGAGGACTTCTTTATCTTCACCAAGATTCTAGATTGAGGATCATACACAGAGATTTAAAAGCAAGTAATATTTTGCTAGATAATGACATGAATCCTAAAATTTCTGATTTTGGGTTAGCACGAATGTGCAGAGGTGATCAAAATGAAGGCAATACAAGTAGAGTTGTTGGTACATATGGTTATATGGCACCTGAATATGCAATTGATGGAGTATTCTCCATCAAATCTGATGTCTATAGCTTTGGCATTTTACTACTAGAGGCTTTAAGCGGAAAGAAAAATAAAGGGATTTCCTACTCAAATAGCAGCTACAATCTTATTGGACATGCATGGAGGTTATGGAAAGAGTGCACCCCAAAGGAATTCATTGATACTTGTTTGGGGGATTCATACGTTATATCTGAAGCCTTGCGATGCATTCATATTGGTCTTTTATGTGTGCAACATCTACCTGATGACAGACCAAATATGACATCTGTGGTTGTAATGTTGTCTAGTGAAAGTGTTTTACCACAACCAAAAGAGCCTGTTTTCTTAACAGAAAAAGTTTCAGTTGAGGAACATTTTGGGCAAAAGATGTACTATTCAACCAATGAAGTAACTATCTCAAAGTTGGAACCAAGATAA 2493 0.4095 MTIPLPFMLVMIIANLLFLSSKISSETNTISQLQPLPDGTTLVSEDGTFELGLFSPGSSTNRYLGIWFKTIKPKTVVWVANRDNPINNTNSTTKLTITKEGNLVLLNQNNNIIWSTNTTTKATNVVAQLLDTGNLVLRDEEDNNPPKFLWQSFDHPSDTLLPGMKLGWEKVTTKGSLNLNRYLTAWNNWEDPSSGHFTYGFSRSTIPEKQMWNGSSLFFRNGPWNGIRFSGTPSLKHRPLFGLTFVYNADECYFQFYPKNSSLISRIVLNQTDYALRRFVWVEESQKWKLYMTVPGEYCDEYNHCGSFGYCAMLGKFPSCKCLLGFEPKSPQNWVASNWSQGCVLSSKSWRCREKDKDGFALFSNMKVPDTNTSWISRYSNMTLEKCKEKCWENCSCTAYGSSDITGKGSGCILWFGDLLDLRLLPKAGQDIYVRVDISQIGAKGGSTSRKVLVVVTGIVSSIIAILVIFVLVYCNKFRSKDVMKTKVKINDSNEEELELPLFDFDTIAFATNDFSSDNKLGQGGFGPVYKGTLPDGQDIAVKRLSQTSTQGLTEFKNEVIFCSKLQHRNLVKVLGCCINEQEKLLIYEYMPNKSLDFFLFDSSQSKLLDWSKRLNIINGIARGLLYLHQDSRLRIIHRDLKASNILLDNDMNPKISDFGLARMCRGDQNEGNTSRVVGTYGYMAPEYAIDGVFSIKSDVYSFGILLLEALSGKKNKGISYSNSSYNLIGHAWRLWKECTPKEFIDTCLGDSYVISEALRCIHIGLLCVQHLPDDRPNMTSVVVMLSSESVLPQPKEPVFLTEKVSVEEHFGQKMYYSTNEVTISKLEPR 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02371 830 ProSiteProfiles PAN/Apple domain profile. 352 437 IPR003609 -
Gma06g02371 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 191 IPR036426 -
Gma06g02371 830 Pfam D-mannose binding lectin 75 186 IPR001480 -
Gma06g02371 830 SUPERFAMILY Protein kinase-like (PK-like) 492 786 IPR011009 -
Gma06g02371 830 Pfam Protein tyrosine and serine/threonine kinase 518 783 IPR001245 GO:0004672|GO:0006468
Gma06g02371 830 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 16 828 - -
Gma06g02371 830 Gene3D Phosphorylase Kinase; domain 1 475 590 - -
Gma06g02371 830 SMART blect_4 33 156 IPR001480 -
Gma06g02371 830 CDD PAN_AP_plant 353 436 - -
Gma06g02371 830 SMART serkin_6 515 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02371 830 ProSiteProfiles Bulb-type lectin domain profile. 27 150 IPR001480 -
Gma06g02371 830 SMART ntp_6 355 436 IPR003609 -
Gma06g02371 830 CDD B_lectin 34 156 IPR001480 -
Gma06g02371 830 PIRSF SRK 1 830 IPR024171 GO:0004674
Gma06g02371 830 Pfam S-locus glycoprotein domain 219 330 IPR000858 GO:0048544
Gma06g02371 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Gma06g02371 830 Pfam Domain of unknown function (DUF3403) 787 830 IPR021820 GO:0004674
Gma06g02371 830 Gene3D Transferase(Phosphotransferase) domain 1 591 796 - -
Gma06g02371 830 ProSiteProfiles Protein kinase domain profile. 515 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02371 830 CDD STKc_IRAK 521 786 - -
Gma06g02371 830 Gene3D - 21 153 IPR036426 -
Gma06g02371 830 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 828 - -
Gma06g02371 830 Pfam PAN-like domain 352 422 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02371 Gma-Chr6 45286705 45293068 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02371 454 801 Receptor kinase-like Gene Family AT4G23190 53.409 1.50e-127 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma06g02371 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02371 - - gmx:100792537 1137.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02371 06 45286705 45293068 Gma06g02371 06 45286705 45293068 ECH