Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02359 ATGTCCTCCACATTGGACATGGTTACTCCAACTCATCCCATCAGAGATGCAGGATTCTTCAACCTTGCAAACTCCAACAACCGATACCTTGGAGTTTGGTACAAAAACATATTTCCAAGAACAACTGTTTGGGTAGCAAACAAAGAAACACCACTTAAAGACAACACTGGCATCTTAGAAGTAGGCACTAATCAAGGAATTCTTAGCATCAAGGATGGTGGAGGAGCCAAAATATGGTCCTCAAGTGCATCACACACACCAAACAAATCGATTGTGGTGAAGTTGTTGGAATCAGGAAACATGGTTGTGAAAGATGGACATAACAACCTTTTATGGCAAAGTTTTGATTATCCTAGTGACACTTTACTTCCAGGAATGAAAATTGGAGTGAACTTCAAAACCGGTCAACATCGAGCTCTAAGATCATGGAAATCTTTATCGGATCTTACTCTAGACACATCTTCATCTTGGTATGATAAGACTATTAGTCTTCAGGAATGTGAGAAATATACCTTGAGCAACTGCTCTTGTACTGCATATGCTCAATTGAATATCAGTGGCAATGGAAGTGGCTGCTTGCATTGGTTTTATGACATTGTTGACATCAGGACACTCCCAACGGGTGGACAAGATTTTTATTTGCGAATGGCTATAGTTTCAAATTTAGATTTACAATTACAAGATCACCACTTCAACTGGAAGAAATTAGCAGGAATTGTGGTTGGCTGTACTATATTCATCATTGGAATTACAATATTCGGATTTTTTTGTATCAGGAGGAAGAAACTCAAGCAGTCAGTTTTGATAATAATTTTGTGGGTTGCAAAAACAAATTATTGGAAAGACAAGAGTAAGAAGGATGACATTGATTTACCAATATTTCACTTTTTAACCATCTCCAATGCCACAAATCACTTTTCAAAGAGTAACAATTTGGGACAAGGTGGCTTTGGACCTATGTACAAGGGCATATTACCAGATGGGCAAGAAATTGTAGTTAAGAGACTTTTTAAAACTTCTGGACAAGGTTTGGACGAGTTCAAAAATGAAGTCATGCTGGTTGCAAAACTTCAACACCGCAATCTTGTAAAACTTCTTGGTTGTTCCATTTAG 1113 0.3783 MSSTLDMVTPTHPIRDAGFFNLANSNNRYLGVWYKNIFPRTTVWVANKETPLKDNTGILEVGTNQGILSIKDGGGAKIWSSSASHTPNKSIVVKLLESGNMVVKDGHNNLLWQSFDYPSDTLLPGMKIGVNFKTGQHRALRSWKSLSDLTLDTSSSWYDKTISLQECEKYTLSNCSCTAYAQLNISGNGSGCLHWFYDIVDIRTLPTGGQDFYLRMAIVSNLDLQLQDHHFNWKKLAGIVVGCTIFIIGITIFGFFCIRRKKLKQSVLIIILWVAKTNYWKDKSKKDDIDLPIFHFLTISNATNHFSKSNNLGQGGFGPMYKGILPDGQEIVVKRLFKTSGQGLDEFKNEVMLVAKLQHRNLVKLLGCSI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02359 370 PANTHER - 17 148 - -
Gma06g02359 370 SUPERFAMILY Protein kinase-like (PK-like) 288 368 IPR011009 -
Gma06g02359 370 Gene3D - 10 115 IPR036426 -
Gma06g02359 370 Pfam D-mannose binding lectin 41 144 IPR001480 -
Gma06g02359 370 ProSiteProfiles Protein kinase domain profile. 306 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02359 370 PANTHER - 152 370 - -
Gma06g02359 370 PANTHER - 17 148 - -
Gma06g02359 370 SMART blect_4 1 118 IPR001480 -
Gma06g02359 370 Pfam PAN-like domain 152 202 IPR003609 -
Gma06g02359 370 PANTHER - 152 370 - -
Gma06g02359 370 CDD PAN_AP_plant 155 217 - -
Gma06g02359 370 ProSiteProfiles Zinc finger SWIM-type profile. 160 203 IPR007527 GO:0008270
Gma06g02359 370 ProSiteProfiles Bulb-type lectin domain profile. 1 116 IPR001480 -
Gma06g02359 370 CDD B_lectin 17 118 IPR001480 -
Gma06g02359 370 Pfam Protein tyrosine and serine/threonine kinase 309 369 IPR001245 GO:0004672|GO:0006468
Gma06g02359 370 Gene3D Phosphorylase Kinase; domain 1 274 370 - -
Gma06g02359 370 SUPERFAMILY alpha-D-mannose-specific plant lectins 42 148 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02359 Gma-Chr6 45039120 45041810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02359 237 367 Receptor kinase-like Gene Family AT4G23190 48.148 3.90e-28 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma06g02359 B_lectin 1.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02359 - - gmx:100802416 330.102