Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02352 ATGTTATGCATTTGGTTTTTCTTATTCTCCTATATGTTGGGAAAATGTACTTTACTAGACAGATTGGAAATGAGTCAATATATCCCAGATGACGGTGAGACTTTGGTTTCAGCCGGTGAAATTACTGAAATGGGTTTCTTCAGTCCTGGAAATTCGACAAGACGATACTTGGGTATATGGTACAAAAATGTATCCCCTTTCACAGTGGTATGGGTGGCTAACCAAAATACACCTCTTGAGAATAACTTTGGAGTTCTCAAACTCGATGAAAAGGGGATACTTGAGCTTCTCAATCCTACAAACAACACTATTTGGTCATCTTCCAACAACATATCAAGCAAAGCCAGGACTAATCCAATCGTGCGTCTCTTGAATTCCGAAAACCTCATGAAAAATGGACAGGGAACAAAAGATGACAGCTTTTTATGGCAGAGTTTTGATCATCCCTGTGACACATACATGCCAGGAATGAAAGTTGGGTGGAACTTAGACACTGACCTTGAATGGTTTTTGTCGTCTTGGAAAAGTGTTGACGATCATGCTGAGGGAGAATATGCTTTGAAAATTGATCTTAGAGGATATCTTCAAATAATTAAATTCAAGGGAATTGTTATAATAACAAGAGCAGGGTCATGGAATGGCTTGTCTACAGTTGGGTATCCGGGACCAACACTTGGAATATCACCAATATTTGTGTTCAACAAAAAGGAGATGTCCTATAGATACAACAGTCTTGATAAATCAATGTTCAGTATTTTTTATTGGACAAGTCAAGCAAGAAATCAACAAGTGGTCTCAATTGGGGAGGTGGATAAATGCAAGAATTATGCATTTTGTGGAGCAAATTCTGTATGCAATTACAATGGTAACCATCCTAATTGTGAATGCCTTAGAGGGTATGATCCCAAGTCTCCTGGTCAATGGAATGTAGGAATTTGGTTCTATGGTTGTGTTCCAAGGAATAAAGCTAGTTGCGGAAATAGTTACGTAGATGGCTTCTTGAAGTACATGGACATGAAATTGCCAGACACCTCTTCATCATGGTTTAGTAAGACCATGAACCTTGATAAGTGTCAAAAGTCATGTCTTAACAACTGTTCTTGTACAGCATATGCAAATTTAGATATGCGTCATGGAGGAAATCACGACAGCCACAGAAATACAAAGAGAAAAATAGTAGAAATCATGGTTGGTGTGACTATTTTTGGATTAATCATCACATGGGCTGCAAGAAAATTTTACATCAAGCATTACAAAAATAAACAGAGAACAGAAGACGGTGACTTGCCGATTTTTGATTTCTCAGTCATAGCTAATGCCACTGAAAACTTCTCAACCAAAAATAAGCTAGGAGAAGGTGGATTCGGACCAGTATACAAGGGCACGTTGATAGATGGACAAGAGTTAGCTGGGAAAAGGCTTTCAAAGAAATCTGGACAAGGGGTAGAAGAGTTCAAAAATGAAGTAGCATTGATTGCAAAACTTCAGCATCGTAATCTTGTTAAGCTTCTGGGTTGTTGCATCGAAGGAGAAGAAAAAATGTTAATTTATGAATACATGCCCAACCAAAGCTTGGACTACTTTGTTTTTGATGAAACCAAAAGAAAGATGCTTGATTGGCATAAGCGTTTCAACATTATTAGTGGCATAGCTCGAGGACTTCTGTATCTTCATCAAGACTCTAGACTGAGGATTATTCACAGAGATCTCAAACCTAGCAATATTTTACTGGATGCAAATTTGGATCCCAAAATATCAGACTTTGGCTTGGCAAGATTATTTTTGGGAGATCAAGTTGAGGCAAACACAAATCGGGTGGCTGGCACATATGGTTACATTCCTCCTGAGTATGCTGCACGTGGGCATTTTTCAGTTAAGTCAGATGTCTATAGTTATGGTGTGATAATACTAGAGATTGTAAGTGGGAAGAAAAACAGAGAATTTTCTGACCCAGAACACTACAATAATCTTCTTGGGCATGCATGGAGATTATGGAGTGAAGAGAGGGCGTTGGAACTATTGGATGAAGTGTTAGGAGAACAATGCGAGCCCGCTGAAGTCATACGATGCATACAGGTAGGCCTACTGTGTGTGCAACAAAGACCAGAGGATAGACCAGACATGTCATCCGTGGTTTTATTGTTGAATGGTGATAAATTATTGTCAAAGCCAAAGGTTCCTGGTTTTTACACTGAAAGGGATGTTTCATCTGAAGCCAGTTCTTCATCGGCAAATCACAAACTATGCTCAGTTAATGAACTTTCCATCACAGTGTTAAATGCAAGATAA 2289 0.3879 MLCIWFFLFSYMLGKCTLLDRLEMSQYIPDDGETLVSAGEITEMGFFSPGNSTRRYLGIWYKNVSPFTVVWVANQNTPLENNFGVLKLDEKGILELLNPTNNTIWSSSNNISSKARTNPIVRLLNSENLMKNGQGTKDDSFLWQSFDHPCDTYMPGMKVGWNLDTDLEWFLSSWKSVDDHAEGEYALKIDLRGYLQIIKFKGIVIITRAGSWNGLSTVGYPGPTLGISPIFVFNKKEMSYRYNSLDKSMFSIFYWTSQARNQQVVSIGEVDKCKNYAFCGANSVCNYNGNHPNCECLRGYDPKSPGQWNVGIWFYGCVPRNKASCGNSYVDGFLKYMDMKLPDTSSSWFSKTMNLDKCQKSCLNNCSCTAYANLDMRHGGNHDSHRNTKRKIVEIMVGVTIFGLIITWAARKFYIKHYKNKQRTEDGDLPIFDFSVIANATENFSTKNKLGEGGFGPVYKGTLIDGQELAGKRLSKKSGQGVEEFKNEVALIAKLQHRNLVKLLGCCIEGEEKMLIYEYMPNQSLDYFVFDETKRKMLDWHKRFNIISGIARGLLYLHQDSRLRIIHRDLKPSNILLDANLDPKISDFGLARLFLGDQVEANTNRVAGTYGYIPPEYAARGHFSVKSDVYSYGVIILEIVSGKKNREFSDPEHYNNLLGHAWRLWSEERALELLDEVLGEQCEPAEVIRCIQVGLLCVQQRPEDRPDMSSVVLLLNGDKLLSKPKVPGFYTERDVSSEASSSSANHKLCSVNELSITVLNAR 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02352 762 Gene3D Phosphorylase Kinase; domain 1 417 519 - -
Gma06g02352 762 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 14 760 - -
Gma06g02352 762 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 179 IPR036426 -
Gma06g02352 762 CDD STKc_IRAK 450 717 - -
Gma06g02352 762 ProSiteProfiles Protein kinase domain profile. 444 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02352 762 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 760 - -
Gma06g02352 762 Pfam Protein tyrosine and serine/threonine kinase 446 712 IPR001245 GO:0004672|GO:0006468
Gma06g02352 762 SUPERFAMILY Protein kinase-like (PK-like) 428 723 IPR011009 -
Gma06g02352 762 Pfam Domain of unknown function (DUF3403) 721 762 IPR021820 GO:0004674
Gma06g02352 762 SMART serkin_6 444 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02352 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 565 577 IPR008271 GO:0004672|GO:0006468
Gma06g02352 762 ProSiteProfiles PAN/Apple domain profile. 325 406 IPR003609 -
Gma06g02352 762 SMART blect_4 26 149 IPR001480 -
Gma06g02352 762 Pfam D-mannose binding lectin 68 175 IPR001480 -
Gma06g02352 762 ProSiteProfiles EGF-like domain profile. 269 306 IPR000742 -
Gma06g02352 762 ProSiteProfiles Bulb-type lectin domain profile. 20 144 IPR001480 -
Gma06g02352 762 CDD PAN_AP_plant 324 379 - -
Gma06g02352 762 Gene3D - 17 146 IPR036426 -
Gma06g02352 762 Gene3D Transferase(Phosphotransferase) domain 1 520 723 - -
Gma06g02352 762 Pfam PAN-like domain 327 380 IPR003609 -
Gma06g02352 762 CDD B_lectin 31 149 IPR001480 -
Gma06g02352 762 Pfam S-locus glycoprotein domain 234 304 IPR000858 GO:0048544
Gma06g02352 762 PIRSF SRK 1 395 IPR024171 GO:0004674
Gma06g02352 762 PIRSF SRK 372 762 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02352 Gma-Chr6 44832928 44873066 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02352 432 762 Receptor kinase-like Gene Family AT4G11530 56.083 5.38e-127 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma06g02352 PK_Tyr_Ser-Thr 7.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02352 - - gmx:100776576 1137.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02352 06 44832928 44873066 Gma06g02352 06 44832928 44873066 ECH