Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02349 ATGGTGCAAAACTTCAGAATGTTATTTATTTGGTTCTTACTCTTATGGTACTTGAGAAACTCCACTTCATTGGACAGTTTAGCAGTGAGTCAATCTATCCATGATGGGGAGACATTAGTTTCAGAAGAAGGAACATTTGAAGTTGGTTTCTTTAGCCCTGGAACTTCAACAAGACGATACGTAGGTATATGGTATAGGAATCTATCTCCTTTAACAGTGGTCTGGGTTGCTAACAGAGAAAATGCACTTCAGAATAACGCAGGAGTTTTGAAACTTGATGAAAGAGGGCTTCTTGTGATTCTCAATGGCACCAATAGCACAATTTGGTGGTCCAACAACACATCAAGCAAAGTAGTAAAGAATCCAATTGCACAGCTTTTGGACTCTGGAAATCTTGTTGTTAGAAATGAAAGGGATATAAATGAGGACAACTTTTTGTGGCAGAGTTTTGATTATCCTTGTGATAAATTTTTGCCAGGAATGAAGCTTGGATGGAACTTAGTAACTGGTCTAGATAGAACAATAACATCTTGGAAAAATGAAGATGATCCTTCTAAGGGAGAATATTCTATGAAACTTGATCTTAGAGGATATCCACAAGTTATTGGATACAAGGGGGATGTAGTAAGATTTAGATCAGGCTCATGGAATGGACAGGCTTTGGTGGGTTATCCAATTCGTCCATTCACACAATATGTACATGAATTAGTGTTTAATGAAAAGGAAGTGTATTATGAGTATAAGACCCTTGATAGATCGACTTTCTTCATAGTTGCATTGACCCCTTCAGGGATTGGGAACTATCTCCTTTGGACAAATCAAACAAGGAGGATAAAAGTTCTCTTATTTGGTGAGTCAGAACCGTGTGAAAAATATGCTATGTGTGGTGCAAATTCTATATGCAACATGGATAATAGCTCTCGGACATGTGATTGCATCAAAGGGCATGTTCCAAAGTTCCCTGAACAATGGAATGTATCACATTGGTATAATGGCTGTGTTCCAAGGAATAAATCTGATTGTAAAACCAACAACACAGATGGCTTCTTGAGGTATACAGACATGAAAATTCCAGATACATCTTCATCATGGTTCGATAAGACCATGAACCTTGACGAATGTCAGAAGTATTGCCTGAAAAACTGCTCTTGTAAAGCATATGCAAATTTGGATATCCGTGATGGAGGAAGTGGGTGTTTACTTTGGTTTGATGATCTGATTGATATGAGACACTTCTCTAATGGAGGACAAGACCTTTATTTGAGAGTCGTTTCTTTAGAGATAGATCACGTTCCCGTCAATGGCCATGGGAAAAACAAAAGGATGATAGGAATCACAGTTGGTGCAAATATACTTGGATTAACTGCATGCGTTTGCATAATAATGATACTCAAAAAGCTAGGGGTAGCAAGAATAATTTATAGGAACCATTTCAAACGAAAATTGAGAAAAGAAGGCATTGATTTGTCAACATTTGATTTCCCAATCATAGCAAGAGCCACTGAAAACTTTGCCACGAGTAACAAATTGGGAGAAGGTGGATTTGGACCTGTGTACAAGggaagactgaaggatgggcaagagtttgctgtgaaaaggctttcaaagaagtcaggacaagggctggaggagttcgaaaatgaagttgtgttgattgcaaaacttcaacatcgtaatcttgtcaagctcataggttgctgcattgaaggcaatgaaagaatgttgatttatgaatatatgccaaacaaaagtttggactgctttatttttgATGAAACCAGAAGACATTTGGtggattggcctatacgattcaacattatctgtggcattgctcgaggagttctttatcttcatcaagactctagactgaggattatacatagagatttgaaaaccagcaatattttactagatgcaaatatggatcctaaaatatcagacttcggcttagcacgaacattctgcggagatcaagttggggcaaacacaaataaggtggctggaacttatggttacatgcctcctgagtatgctactcgtgggcatttctcaatgaaatcagatgtttttagttatggtgtgatagtgctagagattgtaagtggcaagaggaatagagaatttTCAGACCCAACACACTCCCTTAATCTTCTTGGACATGCATGGAGATTGTGGACTGAAGAGAGGGCACTGGAACTACTGGATGGAGTGTTAAGGGAAAGATTCATAGCTTCTGAAGTCATACGATGCATACAGGTGGGCCTGTTATGCGTGCAACAAACACCAGAAGATAGGCCAGACATGTCACCAGTGGTTCTAATGTTGAATGGTGAGAAATTATTGCCCAACCCAAAGGTTCCTGGGTTTTACACAGAAGGAGATGTTCACCTGAATCAGTCTAAACTTAAGAACCCCTTCTCAAGTAATCAAATTTCAATCACGATGTTAGAAGCTAGATAG 2460 0.3028 MVQNFRMLFIWFLLLWYLRNSTSLDSLAVSQSIHDGETLVSEEGTFEVGFFSPGTSTRRYVGIWYRNLSPLTVVWVANRENALQNNAGVLKLDERGLLVILNGTNSTIWWSNNTSSKVVKNPIAQLLDSGNLVVRNERDINEDNFLWQSFDYPCDKFLPGMKLGWNLVTGLDRTITSWKNEDDPSKGEYSMKLDLRGYPQVIGYKGDVVRFRSGSWNGQALVGYPIRPFTQYVHELVFNEKEVYYEYKTLDRSTFFIVALTPSGIGNYLLWTNQTRRIKVLLFGESEPCEKYAMCGANSICNMDNSSRTCDCIKGHVPKFPEQWNVSHWYNGCVPRNKSDCKTNNTDGFLRYTDMKIPDTSSSWFDKTMNLDECQKYCLKNCSCKAYANLDIRDGGSGCLLWFDDLIDMRHFSNGGQDLYLRVVSLEIDHVPVNGHGKNKRMIGITVGANILGLTACVCIIMILKKLGVARIIYRNHFKRKLRKEGIDLSTFDFPIIARATENFATSNKLGEGGFGPVYKGRLKDGQEFAVKRLSKKSGQGLEEFENEVVLIAKLQHRNLVKLIGCCIEGNERMLIYEYMPNKSLDCFIFDETRRHLVDWPIRFNIICGIARGVLYLHQDSRLRIIHRDLKTSNILLDANMDPKISDFGLARTFCGDQVGANTNKVAGTYGYMPPEYATRGHFSMKSDVFSYGVIVLEIVSGKRNREFSDPTHSLNLLGHAWRLWTEERALELLDGVLRERFIASEVIRCIQVGLLCVQQTPEDRPDMSPVVLMLNGEKLLPNPKVPGFYTEGDVHLNQSKLKNPFSSNQISITMLEAR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02349 819 ProSiteProfiles PAN/Apple domain profile. 341 424 IPR003609 -
Gma06g02349 819 Gene3D - 20 150 IPR036426 -
Gma06g02349 819 CDD PAN_AP_plant 338 423 - -
Gma06g02349 819 ProSiteProfiles Bulb-type lectin domain profile. 24 147 IPR001480 -
Gma06g02349 819 Pfam D-mannose binding lectin 72 179 IPR001480 -
Gma06g02349 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 184 IPR036426 -
Gma06g02349 819 Gene3D Hepatocyte Growth Factor 340 421 - -
Gma06g02349 819 Pfam PAN-like domain 341 409 IPR003609 -
Gma06g02349 819 SUPERFAMILY Protein kinase-like (PK-like) 490 785 IPR011009 -
Gma06g02349 819 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 817 - -
Gma06g02349 819 CDD B_lectin 30 153 IPR001480 -
Gma06g02349 819 Pfam Protein tyrosine and serine/threonine kinase 506 772 IPR001245 GO:0004672|GO:0006468
Gma06g02349 819 Gene3D Phosphorylase Kinase; domain 1 477 579 - -
Gma06g02349 819 SMART ntp_6 344 423 IPR003609 -
Gma06g02349 819 CDD STKc_IRAK 510 777 - -
Gma06g02349 819 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Gma06g02349 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Gma06g02349 819 SMART blect_4 30 153 IPR001480 -
Gma06g02349 819 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 19 817 - -
Gma06g02349 819 PIRSF SRK 1 819 IPR024171 GO:0004674
Gma06g02349 819 SMART serkin_6 504 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02349 819 Gene3D Transferase(Phosphotransferase) domain 1 580 781 - -
Gma06g02349 819 ProSiteProfiles Protein kinase domain profile. 504 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02349 Gma-Chr6 44681057 44715282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02349 432 790 Receptor kinase-like Gene Family AT4G23190 52.174 8.14e-125 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma06g02349 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02349 - - gsj:114416252 1527.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02349 06 44681057 44715282 Gma06g02349 06 44681057 44715282 ECH
Gma12g01308 12 18931783 18935789 Gma06g02349 06 44681057 44715282 GST
Gma06g02349 06 44681057 44715282 Gma13g02504 13 39946349 39950479 PCT