Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02348 ATGTTATTTATTTGGTTCTGCTTATTCTCCTACATGACCTCAACTTCCACTTCACTAGACAGTTTAGCAGTGAGTCAATCCATTCGAGACGGCGAgactttggtttcagcaggtggaattactgaacttggtttcttcatccctggaaattcagcaagacgatacttgggtatatggttcagaaatgtatcccctttcacagtggtgtgggtggctaaccgaaatacacctcttgacaataaatcaggagttctcaaactcaatgaaaatgggattcttgtgcttctcaatgctacaaacagcaccatttggtcatcatccaacatatcaagcaaaacagagaatgatccaattgctcgtctcttggattcgggaaattttgtagtgaaaaatggggagcaaactaacgagaacggtgtcttgtggcagagttttgatcatccgtgtgatatatccatgccagaaatgaaaattggatggaacttagagaCTGGTGTAGAAAGATATGTATCATCTTGGACAAGCGACGATGATCCTGCTGAGGGAGAATATGCTTTGAAAATGGATCTTAGAGGCTATCCTCAACTAATTGTGTTTAAGGGACCTGATATAAAATCTAGAGCAGGGCCATTTAATGGCTTCTCTCTAGTTGCAAATCCGGTTCCAAGTCATGATACATTACCAAAATTTGTGTTCAATGAAAAAGAGGTGTATTATGAGTTTGAGCTTCTCGATAAATCAGCCTTCTTTCTGTATAAACTGAGTCCTTCAGGCACAGGGCAGAGTTTGTTTTGGACAAGTCAACTGAGAACCCGGCAAGTGGCCTCAATTGGCGACCAAGATCAATGCGAGACTTATGCATTTTGTGGTGCAAATTCTTTATGCAATTATGATGGTAACCATCCAACTTGTGAATGCCTGAGAGGTTATGTTCCTAAGTCTCCTGATCAGTGGAATATATCAATTTGGGTCAATGGCTGTGTTCCAATGAATAAATCTAATTGCGAAAACAGTGATACAGATGGTTTCTTCAAGTACACACAcatgaaattgccagatacttcttcgtcatggtttaatgcaaccatgaaccttgatgaatgtcacaagtcatgccttaaaaactgttcatgtacagcatatgcaaatttggatgttcgtgatggaggaagcggatgtcttctttggcttaataatctagttgacttgaggagcttctctgaatggggacaagacttttatatcagagtgtctgcttcagaattagATCATGCTGGCCATGGAAATGTCAAGAGAAAGATAGTAGGAATCGCTGTTGGTGTGACTATTTTCGGATTAATCATCTCATGTGTATGCATATTTATAATTAAAAATCAAGGGACTGCAAGAAAAATTTACAACAAACATTACCAAAATAGACTACTGAGGAAGGAAGACATTGATTTGCCAACTTTTGATTTGTCAGTCCtagctaatgcaactgaaaacttttcaactagaaacaagcttggagaaggtggatttggaccagtatacaagggcacactaatagacgggaaagagttagctgtgaaaaggctctcaaagaagtctgaacaagggttggatgagttcaaaaatgaagtggcgttgatttccaaacttcagcaccgtaatcttgtaaagcttcttggttgctgcattgacggagatgaaaaaatgttgatttatgagttcatgcccaaccacagcttggactactttgtttttgATGAAACCAAaaggaagttcctagattggccaaagcgtttcaacattattaatggcattgctcgaggacttctatatcttcatcaagactctaggctgaggattattcacagagatctaaaaacaagcaatgttttactagatgcaaatttgcatcccaaaatatcagactttggcttggctcgatcatttataggagatcaagttgaggcaaacacaaatagggtggctggaacatatggttacatacctcccgagtatgctgcacgagggcatttctccctgaaatcagatgtctttagttatggtgtgatagtactagagattgtaagtgggaagaaaaaccgagaattttcagacccagagcactacaataatcttcttggacatgcatggagattatggactgaagagagggtgctggaactacttgatgaattgttaggagaacaatgtgcgccctttgaagtaatacgatgcatacagCCAAAGGTTCCAGGCTTTTATACTGAAATAGATGTTACATCTGATGCAAATTCTTCATCAGCAAACCAAAAACTGCACTCAGTTAATGAACTTTCCATCACAATTTTAGATGCAAGGTAG 2355 0.1597 MLFIWFCLFSYMTSTSTSLDSLAVSQSIRDGETLVSAGGITELGFFIPGNSARRYLGIWFRNVSPFTVVWVANRNTPLDNKSGVLKLNENGILVLLNATNSTIWSSSNISSKTENDPIARLLDSGNFVVKNGEQTNENGVLWQSFDHPCDISMPEMKIGWNLETGVERYVSSWTSDDDPAEGEYALKMDLRGYPQLIVFKGPDIKSRAGPFNGFSLVANPVPSHDTLPKFVFNEKEVYYEFELLDKSAFFLYKLSPSGTGQSLFWTSQLRTRQVASIGDQDQCETYAFCGANSLCNYDGNHPTCECLRGYVPKSPDQWNISIWVNGCVPMNKSNCENSDTDGFFKYTHMKLPDTSSSWFNATMNLDECHKSCLKNCSCTAYANLDVRDGGSGCLLWLNNLVDLRSFSEWGQDFYIRVSASELDHAGHGNVKRKIVGIAVGVTIFGLIISCVCIFIIKNQGTARKIYNKHYQNRLLRKEDIDLPTFDLSVLANATENFSTRNKLGEGGFGPVYKGTLIDGKELAVKRLSKKSEQGLDEFKNEVALISKLQHRNLVKLLGCCIDGDEKMLIYEFMPNHSLDYFVFDETKRKFLDWPKRFNIINGIARGLLYLHQDSRLRIIHRDLKTSNVLLDANLHPKISDFGLARSFIGDQVEANTNRVAGTYGYIPPEYAARGHFSLKSDVFSYGVIVLEIVSGKKNREFSDPEHYNNLLGHAWRLWTEERVLELLDELLGEQCAPFEVIRCIQPKVPGFYTEIDVTSDANSSSANQKLHSVNELSITILDAR 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02348 784 SUPERFAMILY Protein kinase-like (PK-like) 479 744 IPR011009 -
Gma06g02348 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Gma06g02348 784 Pfam S-locus glycoprotein domain 207 314 IPR000858 GO:0048544
Gma06g02348 784 ProSiteProfiles Protein kinase domain profile. 497 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02348 784 Gene3D Hepatocyte Growth Factor 334 414 - -
Gma06g02348 784 Pfam D-mannose binding lectin 67 173 IPR001480 -
Gma06g02348 784 SMART blect_4 25 148 IPR001480 -
Gma06g02348 784 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 745 - -
Gma06g02348 784 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 14 745 - -
Gma06g02348 784 ProSiteProfiles Bulb-type lectin domain profile. 19 142 IPR001480 -
Gma06g02348 784 ProSiteProfiles EGF-like domain profile. 279 316 IPR000742 -
Gma06g02348 784 Pfam Protein tyrosine and serine/threonine kinase 499 723 IPR001245 GO:0004672|GO:0006468
Gma06g02348 784 Gene3D - 13 145 IPR036426 -
Gma06g02348 784 SMART ntp_6 338 417 IPR003609 -
Gma06g02348 784 CDD PAN_AP_plant 332 418 - -
Gma06g02348 784 PIRSF SRK 1 746 IPR024171 GO:0004674
Gma06g02348 784 Gene3D Phosphorylase Kinase; domain 1 457 572 - -
Gma06g02348 784 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 179 IPR036426 -
Gma06g02348 784 ProSiteProfiles PAN/Apple domain profile. 335 418 IPR003609 -
Gma06g02348 784 SMART serkin_6 497 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02348 784 Gene3D Transferase(Phosphotransferase) domain 1 573 748 - -
Gma06g02348 784 Pfam PAN-like domain 335 403 IPR003609 -
Gma06g02348 784 CDD B_lectin 25 148 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02348 Gma-Chr6 44645446 44648788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02348 426 745 Receptor kinase-like Gene Family AT4G05200 52.923 6.76e-109 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma06g02348 PK_Tyr_Ser-Thr 6.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02348 - - gmx:100815430 1570.44