Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02344 ATGGCTTTTACTTCTAATGACGTCATCCAATGCACCtcttcttcttcgtttgagtatgacgtgtttgtgagcttccgcggtgaagacacacgcaacagcttcaccggttttcttcttcaagctctgaaaaaagaaggcatcgaggccttcaaagatgataaagatatcaggaaaggcgaatccatagcaccagagctaatacgagccattgaagggtctcatgttttccttgttgtcttttccaaggactatgcttcctcaacttggtgcctgcgtgaactagcacatatctggaattgcattcaaacatcacccagacatcttctgcctattttttatgatgttgatccatcacaagtgcgaaaacagagtggagactatcagaaagcctttgcccaacacCAACAAAGTTTCAGGTTCCAAGAGAAGGAAATTAACACATGGAGAGAAGTTCTGGAACGAGTAGCCAATCTCTCTGGTTGGGATATCAGATATAAGCAACAACATGCAGTGATTGAAGAAATTGTCCAGCAGATAAAAAATATCTTGGGTTCCAAATTTTCAACTCTTCCATATGATAATCTAGTTGGGATGGAATCTCATTTTGCTAAATTATCAAAGCTAATATGTCTGGGACCAGCTAATGATGTTCGAGTTGTTGGAATTACTGGGATGGGTGGAATAGGAAAGTCAACTCTTGGTCGAGCTTTATATGAAAGAATCTCTCATCAATTTAATTCTCTTTGTTATATTGATGATGTAAGTAAACTTTATCAAGGTTATGGTACATTAGGTGTACAAAAACAGTTACTTTCACAATCTCTAAACGAAAGAAATCTAGAGATTTGCAATGTATCTGATGGAACACTTCTGGCATGGAAGAGGCTATCCAATGCAAAGGCACTTATAGTTCTTGACAATGTAGATCAAGATAAACAACTTGATATGTTTACAGGAGGTAGAGTTGACCTGTTACGTAAATGTCTAGGTAGAGGAAGCATAGTCATTATAATTTCTAGAGATAAACAAATATTGAAAGCACATGGAGTAGATGTTATTTACCAAGTGAAGCCATTGAATGATGAAGATGCTGCTCGATTGTTTTGTAGAAAAGCTTTCAAAAGTAATTATATTGTGAGTGATTTTGAAAAGATGACTGGTGATGCACTATTACATTGTCAAGGTCATCCCTTAGCAATTGAAGTATTGGGCTCATCTTTGTTTGATAAGGATGTTTCTCATTGGAGAAGTGCATTGGCTTCTCTAAGAGTAAATAAAAGTAAAAATATTATGAATGTGTTGCgaataagttttgatcaattagaggatacacacaaggaaatatttcttgatattgcttgtttcttcaatggtagatatgtggaaggtgtgaaagaagttctagattttcgtggatttaatccagaatatggcctacaagttctcattgaTAAATCATTTATAACCGCGACATTTAAAATTCACATGCATGACTTGTTATGCGATTTAGGCAAGTGTATTGTAAGAGAAAAATCACCTACGAAGCCAAGAAAGTGGAGTAGGTTGTGGGATTTTAAAGATTTCTACAAAGTTATGTCAGACAATATGCCAGCAGAAAATGTCGAGGCCATTGTAGTTCAAATGAATCACCATCATGGGACAACAATGGGGGTTGATGGTCTATCAACAATGAGTCACCTTAAGTTACTTCAACTTGAAAGTTCTATTCCTGATTCAAAAAGGAAATTTTCTGGAATGCTTGTTAATCTTTCCAATGAATTAGGGTATCTTAAATGGATTTTCTATCCTTTTAAGTGTTTGCCACCCAGTTTTGAGCCAGACAAACTTGTTGAGTTGATCTTGCGTCATAGCAACATCAAAAAACTTTGGAAAGGCAGAAAGGTAGTGCATTTGGATCTCTCTCACTCCAAAAATCTAATTAAAATGCCATATATTGGAGATTCCCTATATCTTGAGACGCTTAATCTCCAAGGATGTATTCAACTCAAAGAGATTGGTCTGTCCATTGTTCTTTCACGAAGGCTTTCTTATCTGGATTTGAAAGATTGCAAATGTCTTATCAATTTGCCACGGTTTGGAGAGGACCTAATTCTTCAAATCCTAGTACTCGAAGGATGTCAAAAACTCAGACACATTGATTCATCCATCGGTCTTCTAAAAAAGCTCAGAAGATTGGATTTGAAAAACTGCAAAAATCTAGCAAGCTTACCCAATAGCATACTAGGCCTCAATTCTCTTGAATGTCTGAATCTCTCTGGCTGTTCAAAACTGTACAACATCCAGTTATTATATGAACTAAGGGATGCAGAGCATTTGAAGAAGATTGATATAGATGGAGCTCCTATTCATTTCCAATCAACATCTTCCTACTCCAGACAACATAAAAAATCAGTTGGGTGCTTAATGCCTTCCTCGCCAATTTTTCCATGTATGTGTGAACTTGATCTAAGTTTCTGTAATTTAGTTCAAATTCCTGATGCTATTGGAATTATATGTTGCTTAGAAAAGCTAGATTTAAGTGGTAACAATTTTGTTACACTGCCCAACCTCAAGAAGCTTTCCAAACTGTTCAGTTTAAAGTTACAACATTGCAAGAAGTTGAAATCTTTGCCTGAGCTCCCTTCACGGATTGACTTGCCAACTGATGCATTCGATTGTTTTAGGCTAATGATTCCATCTTATTTCAAGAATGAAAAAATAGGATTATACATTTTTAACTGCCCAGAATTAGTTGATAGGGATCGCTGCACTGACATGGCTCTTTCATGGATGATACTAATTTCTCAGATGTCTCTGCTGTACCAGGTGCAATTCAAACTTCCTTTTAACCGGAGGATTCAAAGTGTTACCACTGGAAGTGAAATACCAAGGTGGTTCAATAATCAGCATGAGGGAAATTGTGTAAGCTTAGACGCATCTCCTGTTATGCATGACGATAATTGGATTGGCGTTGCGTTTTGTTTAATGTTCGTGGTACCTCATGAAACACTCTCAGCGATGGGTTTTTCAGATTCAGATTGCCCACCATGGCATTCTTTTGGTGATATTCCAGTGGATTTTTATGGAGATCTAGATCTAGAACTTGTTTTAGACAAATCAGATCACATGTGGCTATTCTTTGTTAGTCGAACACAATTCAGTAGACAATTCTCTCTCAAGCTCAAATATCTTGGCAGGTTGGTTTTGAAATGTGATAAAGGGATGGGCTGGAGTGAGTCATATGCTGAGGTGAAGAAATACGGATATCGCTGGGTATATAAAGAGGATAAAGAAGAGCCATCAAATCCGTTGGCTAGGAAGCGCAAATTTGAGGAAATTGAAGAAAATGAAGGAAAAAGAAAGAAAGGAATAATCTCAGCAGAAGGGAGAAAAGATGATGCAACCTCCTCCCAGGAAAAGACAATCAAGTTGTTGCAAAATGAATTTGAAAATCTTAGCCTGTAG 3465 0.3131 MAFTSNDVIQCTSSSSFEYDVFVSFRGEDTRNSFTGFLLQALKKEGIEAFKDDKDIRKGESIAPELIRAIEGSHVFLVVFSKDYASSTWCLRELAHIWNCIQTSPRHLLPIFYDVDPSQVRKQSGDYQKAFAQHQQSFRFQEKEINTWREVLERVANLSGWDIRYKQQHAVIEEIVQQIKNILGSKFSTLPYDNLVGMESHFAKLSKLICLGPANDVRVVGITGMGGIGKSTLGRALYERISHQFNSLCYIDDVSKLYQGYGTLGVQKQLLSQSLNERNLEICNVSDGTLLAWKRLSNAKALIVLDNVDQDKQLDMFTGGRVDLLRKCLGRGSIVIIISRDKQILKAHGVDVIYQVKPLNDEDAARLFCRKAFKSNYIVSDFEKMTGDALLHCQGHPLAIEVLGSSLFDKDVSHWRSALASLRVNKSKNIMNVLRISFDQLEDTHKEIFLDIACFFNGRYVEGVKEVLDFRGFNPEYGLQVLIDKSFITATFKIHMHDLLCDLGKCIVREKSPTKPRKWSRLWDFKDFYKVMSDNMPAENVEAIVVQMNHHHGTTMGVDGLSTMSHLKLLQLESSIPDSKRKFSGMLVNLSNELGYLKWIFYPFKCLPPSFEPDKLVELILRHSNIKKLWKGRKVVHLDLSHSKNLIKMPYIGDSLYLETLNLQGCIQLKEIGLSIVLSRRLSYLDLKDCKCLINLPRFGEDLILQILVLEGCQKLRHIDSSIGLLKKLRRLDLKNCKNLASLPNSILGLNSLECLNLSGCSKLYNIQLLYELRDAEHLKKIDIDGAPIHFQSTSSYSRQHKKSVGCLMPSSPIFPCMCELDLSFCNLVQIPDAIGIICCLEKLDLSGNNFVTLPNLKKLSKLFSLKLQHCKKLKSLPELPSRIDLPTDAFDCFRLMIPSYFKNEKIGLYIFNCPELVDRDRCTDMALSWMILISQMSLLYQVQFKLPFNRRIQSVTTGSEIPRWFNNQHEGNCVSLDASPVMHDDNWIGVAFCLMFVVPHETLSAMGFSDSDCPPWHSFGDIPVDFYGDLDLELVLDKSDHMWLFFVSRTQFSRQFSLKLKYLGRLVLKCDKGMGWSESYAEVKKYGYRWVYKEDKEEPSNPLARKRKFEEIEENEGKRKKGIISAEGRKDDATSSQEKTIKLLQNEFENLSL 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02344 1154 MobiDBLite consensus disorder prediction 1099 1138 - -
Gma06g02344 1154 ProSiteProfiles Leucine-rich repeat profile. 840 861 IPR001611 GO:0005515
Gma06g02344 1154 ProSiteProfiles TIR domain profile. 17 183 IPR000157 GO:0007165
Gma06g02344 1154 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 693 1018 - -
Gma06g02344 1154 Gene3D - 358 442 IPR042197 -
Gma06g02344 1154 Gene3D - 11 182 IPR035897 -
Gma06g02344 1154 Gene3D Ribonuclease Inhibitor 704 788 IPR032675 -
Gma06g02344 1154 Gene3D Ribonuclease Inhibitor 548 703 IPR032675 -
Gma06g02344 1154 Pfam C-JID domain 958 1097 IPR045344 -
Gma06g02344 1154 Pfam Leucine Rich Repeat 615 632 IPR011713 -
Gma06g02344 1154 SUPERFAMILY L domain-like 558 883 - -
Gma06g02344 1154 SUPERFAMILY "Winged helix" DNA-binding domain 429 532 IPR036390 -
Gma06g02344 1154 Gene3D - 183 353 IPR027417 -
Gma06g02344 1154 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 694 - -
Gma06g02344 1154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 452 IPR027417 -
Gma06g02344 1154 SMART till_3 18 158 IPR000157 GO:0007165
Gma06g02344 1154 Gene3D Ribonuclease Inhibitor 794 886 IPR032675 -
Gma06g02344 1154 CDD ABC_ATPase 218 353 - -
Gma06g02344 1154 Pfam NB-ARC domain 215 436 IPR002182 GO:0043531
Gma06g02344 1154 PRINTS Disease resistance protein signature 724 740 - -
Gma06g02344 1154 PRINTS Disease resistance protein signature 295 309 - -
Gma06g02344 1154 PRINTS Disease resistance protein signature 393 407 - -
Gma06g02344 1154 PRINTS Disease resistance protein signature 219 234 - -
Gma06g02344 1154 Pfam TIR domain 19 189 IPR000157 GO:0007165
Gma06g02344 1154 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 161 IPR035897 -
Gma06g02344 1154 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 693 1018 IPR044974 GO:0006952
Gma06g02344 1154 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 694 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02344 Gma-Chr6 44587885 44592209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02344 14 764 WRKY Transcription Factor Family AT4G12020 28.987 4.47e-76 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02344 - - gsj:114416945 2305.02