Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02325 ATGAGTCGAGGAAGTGGAGGTGGATACGATCGTCACATCACTATTTTCTCCCCTGAAGGACGTCTCTTTCAAGTGGAGTATGCTTTCAAGGCTGTGAAGGCTGCAGGAATCACCTCGATTGGTGTCCGAGGAAAGGATTCAATTTGTGTCGTTACTCAGAAGAAGGTTCCGGATAAGCTTTTGGACAACACAAGTGTTACACACCTCTTTCCCATCACCAAGTACCTTGGATTATTGGCTACTGGCATGACAGCTGATGCTAGGACACTGGTCCAACAAGCAAGAAATGAAGCAGCTGAGTTTCGCTTTACATATGGATATGAGATGCCTGTAGATGTATTAGCTAAATGGATTGCAGATAAATCACAAGTCTATACTCAACATGCTTATATGAGACCACTCGGAGTAGTTGCTATGGTTTTGGGTATTGATGATGAATATGGACCTCAGCTATACAAATGTGATCCAGCTGGTCATTACTTTGGTCACAAGGCAACAAGTGCTGGATTGAAGGACCAAGAGGCAATTAATTTCTTGGAAAAGAAGATGAAGAATGACCCTTCATTTACATATGAGGAGACGGTTCAGACTGCCATTTCTGCCCTGCAATCAGTTCTTCAGGAGGATTTTAAGGCCACTGAGATTGAGGTTGGAGTGGTGCGAAAGGATAATCCAGAATTCAGAGTTTTAACCACCGACGAAATTGATGAGCACTTGACTGCAATAAGTTCCGTGTTCCAAACAATGAGTTTGAGTATGAGCTTGTGTGGTAATTACAGTCTTCAGCTTCAAAATCGCAGAATCGTAAGCTGCAATCTTCACCAGGATGGCAGGCATATTGTTCCCATCAATACGCACCAAAAACCTTCCAAACCTGAAAAGTGTCTTCGGTCCAAATGGAAGATTAATGGCAATAACATTGGGACATGCATTGGAGTCATGACAGTGGCACACTTGGTTGCTCCAGTCGCTGCAAAAGCTGAAGTGGCTGCTTCTATTTATGCTTTGGCTGATGGAAGCCTCGGTGACTGGTTTGGAGGCTTTCTATTTTCAGCTGGACAGCAGGCCAATGAAGCTGTTCAGGGCCAATTAACCTCTCTCAGTTTCACTAGTTTGGCTGTAATTTATGGGGCAGGGCTTGTTACCAGCCTTTCTCCCTGTACACTTAGTGTCTTACCACTGACCCTTGGTTACATTGGGGCATTTGGCTCTGGCAAAAGCAAAGCACAGGTTTCTACTAAGATGCAAAGATCTGATATGTAG 1263 0.441 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTQKKVPDKLLDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKDNPEFRVLTTDEIDEHLTAISSVFQTMSLSMSLCGNYSLQLQNRRIVSCNLHQDGRHIVPINTHQKPSKPEKCLRSKWKINGNNIGTCIGVMTVAHLVAPVAAKAEVAASIYALADGSLGDWFGGFLFSAGQQANEAVQGQLTSLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSKAQVSTKMQRSDM 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02325 420 ProSiteProfiles Proteasome alpha-type subunit profile. 24 239 IPR023332 -
Gma06g02325 420 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 1 243 - -
Gma06g02325 420 SMART Proteasome_A_N_2 9 31 IPR000426 GO:0006511|GO:0019773
Gma06g02325 420 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 244 IPR029055 -
Gma06g02325 420 PANTHER PROTEASOME SUBUNIT ALPHA TYPE-6 1 243 - -
Gma06g02325 420 ProSitePatterns Proteasome alpha-type subunits signature. 9 31 IPR000426 GO:0006511|GO:0019773
Gma06g02325 420 CDD proteasome_alpha_type_6 8 220 IPR034642 GO:0019773
Gma06g02325 420 Pfam Proteasome subunit 36 220 IPR001353 GO:0005839|GO:0051603
Gma06g02325 420 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 8 242 IPR029055 -
Gma06g02325 420 Pfam Cytochrome C biogenesis protein transmembrane region 376 410 IPR003834 GO:0016020|GO:0017004
Gma06g02325 420 Pfam Proteasome subunit A N-terminal signature 9 31 IPR000426 GO:0006511|GO:0019773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02325 Gma-Chr6 44056499 44066397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02325 314 411 Chloroplast and Mitochondria Gene Families AT5G54290 69.811 6.25e-36 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02325 K02730 - gmx:732640 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02325 06 44056499 44066397 Gma06g02325 06 44056499 44066397 ECH