Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02315 ATGAATAAGCTGCAAAACCAATTGGAGAAAGTGGAGTCTCTTACTCAAGATCTTGAAGAAGGGCTTGAGTTTCCATTTAGGCATTTAATAAACACTAGGGGCATTGTTAGATCCTGTGCCTGTCCTATAAATTCTAGTGCAGATCCTGTGGCAACAACAGAAGGAGAGTATGAGGAGGTGATTCAGCTGTGTGGCAAGACCCTTGATTCTGTTGAGAAGAATGCCTGTCCTTTGGATGCTGGTTGCAAAGTCACAGATCTGGATAATTCACAACTCTCGAAAGCTTTGGACTGGGCAACAAGGAAAATAATAGCTTTAGGAGCTACAAGAGGCTTGCTATATTTGCACAAACAGTGTGATCCAAAGATTATTCATAGGGATGTGAAGGCAGAAAATATCTTGCTTGATGATTATTGTGAGGCTGTGGTGGGAGATTTTGGGTTGGCAAAGCTATTAGACCACAAGGATTCACATGTGACAACATCAACGTTGGTTCGGTACCAGTTGCCTGTGGTCGTCATTGTTTTCAACAATGGGGGTGACCATAGACATCCAGAGGAGATAGATGGACCTCACAAAGATGATCCTGCCCCCACAGATTTTGTCCCAAATGCAGGGTACCATGCTTTGATACAAGCTTTTGGTGGAAAGGGCTATCTTGTTGGGACGCGTGATGAACTCAAGTCTGCCCTTTCAGAATCCTTCTCTGCTAGGAAACCAGATGTAGTAAATGTTGTGATTGATCCCTATGCTGGTTCAGAGAGTGGGAGGATGCAATATAAGAATTGA 789 0.4347 MNKLQNQLEKVESLTQDLEEGLEFPFRHLINTRGIVRSCACPINSSADPVATTEGEYEEVIQLCGKTLDSVEKNACPLDAGCKVTDLDNSQLSKALDWATRKIIALGATRGLLYLHKQCDPKIIHRDVKAENILLDDYCEAVVGDFGLAKLLDHKDSHVTTSTLVRYQLPVVVIVFNNGGDHRHPEEIDGPHKDDPAPTDFVPNAGYHALIQAFGGKGYLVGTRDELKSALSESFSARKPDVVNVVIDPYAGSESGRMQYKN 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02315 262 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Gma06g02315 262 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 162 252 IPR029061 -
Gma06g02315 262 SUPERFAMILY Protein kinase-like (PK-like) 85 162 IPR011009 -
Gma06g02315 262 Gene3D Transferase(Phosphotransferase) domain 1 86 188 - -
Gma06g02315 262 Pfam Protein BPS1 2 33 IPR004320 GO:0048364|GO:0048367
Gma06g02315 262 Pfam Protein kinase domain 95 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02315 262 Coils Coil 1 21 - -
Gma06g02315 262 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 161 245 IPR011766 GO:0003824|GO:0030976
Gma06g02315 262 PANTHER TYROSINE KINASE FAMILY PROTEIN 93 162 - -
Gma06g02315 262 PANTHER OS01G0253100 PROTEIN 93 162 IPR045271 GO:0004714|GO:0006468
Gma06g02315 262 ProSiteProfiles Protein kinase domain profile. 1 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02315 Gma-Chr6 43867545 43871248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02315 95 163 Receptor kinase-like Gene Family AT5G16000 82.609 5.96e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Gma06g02315 TPP_enzyme_C 3.3e-07 CL0254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02315 K12261 - gsj:114397299 310.457