Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02275 ATGGGAGTTCCAGAGAGAGACCCTCTTGCACAATTGAGTTTGCCTCCTGGGTTTAGGTTTTACCCCACAGATGAGGAGCTTTTGGTTCAGTACCTTTGCCGCAAGGTTGCTGGCCATCATTTCTCTCTTCCAATCATTGCTGAAGTTGATTTGTACAAGTTTGATCCATGGGTTCTTCCAGGTAAGGCAGTGTTTGGAGAGAAGGAGTGGTACTTTTTTAGCCCAAGAGACAGGAAGTACCCGAATGGTTCACGACCAAACAGAGTCGCGGGTTCTGGGTATTGGAAAGCAACTGGAACAGACAAGATCATCACCACTGAAGGTAGAAAAGTTGGCATAAAAAAAGCACTTGTTTTCTACATTGGCAAAGCACCCAAAGGCTCCAAAACCAATTGGATCATGCACGAGTATCGCCTTCTCGATTCTTCCCGCAAACACAACCTCGGAACCGCAAAGCTTGATGATTGGGTTCTATGTCGTATCTATAAGAAGAACTCAAGTTCACAAAAGGTTGAGGCTAATTTTTTGGCTATGGAATGCAGCAATGGGTCATCACCTTCTTCATCGTCCCACGTGGATGACATGCTGGGATCGTTGCCGGAGATAAATGACCGGTGCTTCACCCTGCCACGAGTGAACTCACTCAGAACAATGCACCAGCAGGATGAGAAATTCGGGTCTCCGAACATGGGATCCGGGTTTTTCTCGGATTGGGTTAACTCGACCGATCTCGATTCGATTTCCGAATTCGAGTCGGGTTGCCAAACCCAAAGAATGGTGAATTATGATTGCAATGACTTTTTTGTTCCTTCTCTGCCGCCCTTGGGCCATGTGGACTACATGGTGGATGCACCCTTGGAGGAGGAGGTTCAAAGTGGTGTGAGAACCCGACGGGTCGATGGGCCGGGGCATTTTCAACCGAATCCAGATACCCGATTGTTACCGGGCTCAGGTGACCCATTCGGGTTTGGGTTTATTATGGGTCAGCAAGTTGGGTTCGGGGTTAGGGAGTGA 1014 0.4832 MGVPERDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLPIIAEVDLYKFDPWVLPGKAVFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYIGKAPKGSKTNWIMHEYRLLDSSRKHNLGTAKLDDWVLCRIYKKNSSSQKVEANFLAMECSNGSSPSSSSHVDDMLGSLPEINDRCFTLPRVNSLRTMHQQDEKFGSPNMGSGFFSDWVNSTDLDSISEFESGCQTQRMVNYDCNDFFVPSLPPLGHVDYMVDAPLEEEVQSGVRTRRVDGPGHFQPNPDTRLLPGSGDPFGFGFIMGQQVGFGVRE 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02275 337 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Gma06g02275 337 SUPERFAMILY NAC domain 10 165 IPR036093 GO:0003677|GO:0006355
Gma06g02275 337 ProSiteProfiles NAC domain profile. 14 164 IPR003441 GO:0003677|GO:0006355
Gma06g02275 337 PANTHER NAC TRANSCRIPTION FACTOR 56 1 315 - -
Gma06g02275 337 Gene3D NAC domain 23 170 IPR036093 GO:0003677|GO:0006355
Gma06g02275 337 PANTHER NAC DOMAIN-CONTAINING PROTEIN 55 1 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02275 Gma-Chr6 42488091 42490361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02275 1 218 NAC Transcription Factor Family AT4G27410 71.250 1.97e-114 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma06g02275 NAM 2.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02275 - - gmx:732639 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02275 06 42488091 42490361 Gma06g02275 06 42488091 42490361 ECH