Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02253 ATGATGAACTTTGGGACCATGGGAAGAGCTTTCCTTCACCCCAACAACAAGTCCATCTCAACAACAAGCCCTACTTTCCTCGCGCTCTGTTTTTCTTCTTCTTCCTCGCTTCTTCTTCTTCGCGACCTTACAGTACAGGCTTTTGTAACTGCACGTTACCCAGGGTTGAAGTCAGATAAGTTGCTGTTTGGTGGCAGTTGGGACAAGGAAGGGACAAAGGAGAGCACACATCTTTTAGAAGAAATTGAAAAGGTTAGAGTGGTGACAGTGAAGTGCCTTAAGAATGTCACAAGTGGAGATGCTGAGTTTTGGGCAGAAGTCACAATCATTGCCAGAATGCACCACCTCAACTTGGTGAGGATGTGGGGATTCTGTGCTGAGAAGGGCCAAAGGATACTTGTCTATGAACACATCCCTGGTGGATCATTGGACAAGTACCTCTTCAGGGTCAATAAGTCTCATAACAATAACCATCTCAAGGAGCAATCAAGTAGTTTGAATCCAAACACACCACAACAAGTCATTTCACTATGTTATACCTATGATGGTCAAGTTGGTGACTAA 564 0.4433 MMNFGTMGRAFLHPNNKSISTTSPTFLALCFSSSSSLLLLRDLTVQAFVTARYPGLKSDKLLFGGSWDKEGTKESTHLLEEIEKVRVVTVKCLKNVTSGDAEFWAEVTIIARMHHLNLVRMWGFCAEKGQRILVYEHIPGGSLDKYLFRVNKSHNNNHLKEQSSSLNPNTPQQVISLCYTYDGQVGD 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02253 187 PANTHER OS07G0415500 PROTEIN 82 175 - -
Gma06g02253 187 SUPERFAMILY Protein kinase-like (PK-like) 86 176 IPR011009 -
Gma06g02253 187 Gene3D Phosphorylase Kinase; domain 1 76 137 - -
Gma06g02253 187 Pfam Protein tyrosine and serine/threonine kinase 81 154 IPR001245 GO:0004672|GO:0006468
Gma06g02253 187 PANTHER OS10G0101000 PROTEIN 82 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02253 Gma-Chr6 41995241 41997741 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02253 85 148 Receptor kinase-like Gene Family AT3G45860 45.312 3.94e-14 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma06g02253 PK_Tyr_Ser-Thr 7.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02253 - - gmx:100775518 182.956