Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02247 ATGAGTACTATTTCAAAATCAAGTACATCACTGCCCCTTCTCATTGCTAGTGTGGATAATGGAGAGAGTTCTTCTGATAAGAAACAACCAAACACCTCGGCCGCACTTGATTCCTCCCAAATCGAAGCCATTGAAACTGCACCCAGAAAGTCCATTGACACTTTTGGACAGAGAACTTCAATCTACCGTGGTGTAACAAGGCATAGGTGGACGGGGAGGTACGAGGCTCACCTGTGGGATAATAGTTGTAGAAGAGATAGACAAACTCGCAAAGGAAGGCAAGGTGGTTATGATAAAGAAGAAAAGGCAGCTAGAGCCTACGATTTGGCAGCACTAAAATACAGGGGAACAACCACAACAACAAATTTTCCACGGATCTATTTAGTTCATGTGATTTCTCCCCACAATGCATACAACTACAAGTATTCCAGTAGAATATTCTCAGAGCAAAAGTTCCCGTTCAAGTTTGTGGCGCAGTCCTTTGGGGATAAATGGAAGCTAAATGACATAAGTACTAATGTCGACCCTCTCGACGCCAGCCTGGACAGGCTCGAGGCAGCCATGGCCAACCTCACCGCAGTGGATTCCGATCTCCATGCATTTCACCTTCGTTTAGACGCGCTCCACGCTTCCATGCTCTTCAAAATATATCTCATTAGCCTGAAACTGGATACCCTGATCTCCCGCCAACGCTCCCCGTCACCTTCTCTGGTGCAGCCACCACTATTCCCTCCTTTAGCGCAACCACCACCACCATCACTATTGCTACCATCGCCGCCACTGTTCCCTCCTTCAACACAACCACCACCACCACCGTCGCCGCCGTTACTGTTCCCTCCTTCAGCACAACCACCACCACCACCATCACTACCGCTACCGCCGCTGCCACCGTTTCCTCCTTCAGTGCAACCACCACCGACACCGCCAGCTCCTCCGCCTTGCTCTCACGTGCCTCCTCCCATGGCTGGACAACGAGATAGTCTTATTATTGGACTTGATTCCAGCACCATCGACTTCCCCTTGTGGCCTCTGCCGCTCCGCACCAACACCCGTCGTTACCGCAAGATCCCCTACGACAATGAAATCTTCCTGCTCGGGGACGCTACCGTCACGCACCGGATTCATCTGCATTGGATTTGGATTCTCTTCGCTACTGCGACTCCACTTTGCTCCGTTCATCATCAGCGTCAACGGCCACCACCACATCCACCACCACCTCCGAAGCCACTGCCTCCACCATCATCTACGTCGCCATCTTTAACACCTCCCTTGATTGCTCCACGGCGTGGGTCACACACCCACTCCTCTCCTTGGCCGTTCAGTTTTGTGGCACGAGTCACACACTCGCTTACTGCTTTAGACATTAATAATGTTGGGCCCAAACCAGCCAACAAACAAAGTAACTTCCCTAATGTACCTCTTGTTTTCTAA 1431 0.5073 MSTISKSSTSLPLLIASVDNGESSSDKKQPNTSAALDSSQIEAIETAPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRRDRQTRKGRQGGYDKEEKAARAYDLAALKYRGTTTTTNFPRIYLVHVISPHNAYNYKYSSRIFSEQKFPFKFVAQSFGDKWKLNDISTNVDPLDASLDRLEAAMANLTAVDSDLHAFHLRLDALHASMLFKIYLISLKLDTLISRQRSPSPSLVQPPLFPPLAQPPPPSLLLPSPPLFPPSTQPPPPPSPPLLFPPSAQPPPPPSLPLPPLPPFPPSVQPPPTPPAPPPCSHVPPPMAGQRDSLIIGLDSSTIDFPLWPLPLRTNTRRYRKIPYDNEIFLLGDATVTHRIHLHWIWILFATATPLCSVHHQRQRPPPHPPPPPKPLPPPSSTSPSLTPPLIAPRRGSHTHSSPWPFSFVARVTHSLTALDINNVGPKPANKQSNFPNVPLVF 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02247 476 ProSiteProfiles AP2/ERF domain profile. 61 124 IPR001471 GO:0003700|GO:0006355
Gma06g02247 476 MobiDBLite consensus disorder prediction 397 420 - -
Gma06g02247 476 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 19 124 - -
Gma06g02247 476 MobiDBLite consensus disorder prediction 393 433 - -
Gma06g02247 476 PRINTS Proline rich extensin signature 269 285 - -
Gma06g02247 476 PRINTS Proline rich extensin signature 296 313 - -
Gma06g02247 476 PRINTS Proline rich extensin signature 248 269 - -
Gma06g02247 476 PRINTS Proline rich extensin signature 233 245 - -
Gma06g02247 476 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM 19 124 - -
Gma06g02247 476 Pfam AP2 domain 61 116 IPR001471 GO:0003700|GO:0006355
Gma06g02247 476 SUPERFAMILY DNA-binding domain 60 125 IPR016177 GO:0003677
Gma06g02247 476 CDD AP2 60 124 IPR001471 GO:0003700|GO:0006355
Gma06g02247 476 Gene3D AP2/ERF domain 61 126 IPR036955 GO:0003700|GO:0006355
Gma06g02247 476 MobiDBLite consensus disorder prediction 234 324 - -
Gma06g02247 476 MobiDBLite consensus disorder prediction 237 319 - -
Gma06g02247 476 MobiDBLite consensus disorder prediction 457 476 - -
Gma06g02247 476 PRINTS Ethylene responsive element binding protein signature 106 126 IPR001471 GO:0003700|GO:0006355
Gma06g02247 476 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Gma06g02247 476 MobiDBLite consensus disorder prediction 16 39 - -
Gma06g02247 476 SMART rav1_2 61 130 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02247 Gma-Chr6 41907236 41910517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02247 41 124 AP2-EREBP Transcription Factor Family AT5G17430 81.609 8.52e-45 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma06g02247 AP2 5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02247 K09285 - gmx:102669105 231.876