Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02237 TTTATATTGTCGAGAATTTTATTTTTCATTTTGCATGGTGCTTATGTCTATCTTATTCTTATGAGGTGATGAATTTCCTATCCTATTTGAATGAACGCGGGGATGATGGGCCAATGGTTATTATATTGACACATGCCAGAATAAAAGATGCACAGGTGAGCAATTCCTTCAAGGCGTCAAAACTATTGATTAATGATCCTATGTTGGAAATTCAGGAATTTAAAGAGAGGCTTTTAGATTTAGGTGTTGAGGTGAGTCGAGTTTTGCTACCTGGCGATCAAGCAAGCTCACAAGTTTCAGGGGGAAGTCAGCTATCATCAAAGGATTCATTTCTTTCAAAGGCTGAAGCCAAAACTATTTTAGAAATCAATGCCATTTCTGAGGAAGATGTTTGTGTTACGGTGGGGACTATTAGCAAAATAGTCATGGATAACCATTCATGGTGTTATCCAGCCTGTGCTCAATGTCATAGGAAAACTGACATCCAAACAGGACCATTCACATGTGGATGTGGCAAGGATAATGATCAGAGTGTTCTGAGGTATAGAGTTGAAGTGATGGTTACCCAAAACAATGAGAGTAACAAATTTTTGCTCTGGGATCGTGAATGTGCTGAATTGATTGGTGAAACAGCTGATGATGTGAATATGGTCAAGATTGAAGATGGTGATCTTGATTTGAATGCTTCCCCTCAAGCACTTGACAAATTGTTGGGTCATGTGCTTGCTTTTAAGGTCGGGATTCAATCAAAATTCAAAAATGCAGTTGTACTTAGATACTCAAAAGACCTGAATTTGATCAATGTTGTTCTCGAGATGCTGCCTGATAGTGAGGCATGTTCCAAAATAGATCCTTCCAATGTTGATTGCAATGATGCTACACAAGCTGAACGTCAATCTTTGTCTGTCACAGCTGACCATGATCCGGTTGCGGGATTGCCTTTAACACCCAAAAAGCGGATGTCATCTGATGAAGCCGATGATGAGTTAGGGAGCTCTCAAATTTCGCCAGCCCAACTATCGTCTAACCAATTGACAAGACATTCTCATAAGAGCTAA 1058 0.397 YIVENFIFHFAWCLCLSYSYEVMNFLSYLNERGDDGPMVIILTHARIKDAQVSNSFKASKLLINDPMLEIQEFKERLLDLGVEVSRVLLPGDQASSQVSGGSQLSSKDSFLSKAEAKTILEINAISEEDVCVTVGTISKIVMDNHSWCYPACAQCHRKTDIQTGPFTCGCGKDNDQSVLRYRVEVMVTQNNESNKFLLWDRECAELIGETADDVNMVKIEDGDLDLNASPQALDKLLGHVLAFKVGIQSKFKNAVVLRYSKDLNLINVVLEMLPDSEACSKIDPSNVDCNDATQAERQSLSVTADHDPVAGLPLTPKKRMSSDEADDELGSSQISPAQLSSNQLTRHSHKS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02237 351 PANTHER REPLICATION FACTOR A 1, RFA1 34 230 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gma06g02237 351 Pfam Replication factor-A C terminal domain 135 221 IPR013955 -
Gma06g02237 351 Gene3D - 97 267 IPR012340 -
Gma06g02237 351 CDD RPA1_DBD_C 113 245 IPR013955 -
Gma06g02237 351 SUPERFAMILY Nucleic acid-binding proteins 117 248 IPR012340 -
Gma06g02237 351 MobiDBLite consensus disorder prediction 298 351 - -
Gma06g02237 351 MobiDBLite consensus disorder prediction 327 345 - -
Gma06g02237 351 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 34 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02237 Gma-Chr6 41037872 41039668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02237 59 225 Core DNA Replication Machinery Family AT5G08020 28.070 1.14e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02237 - - gsj:114416186 556.599