Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02234 ATGCATGCCAAGGTGTTTCTTATTTATGATAGTGCTCTAAGTGCAAATCCACTAACGGGTTTGATCCCAGCAGAGGTAGCAAACATCTCCCCTCTCCAAAGTTTGACCCTGGAATTCAATCAACTGTCTAGAAATCTTCCTCCTGAGCTTGGGAATCTTCCAAATCTTCAAAGATTGCTACTTACCTCCAACAATTTTACTGGAGAATTACCCACAACCTTTCCAAGACTCACTACCTTGCAAGATGTGATTTTGAGGAGTTGCAACATTAATGGGACAATACCAGAATATCTTGGGACTAATCTAGTATACAAACCTTGGAAATATGGTGCTGAAGGATTTCAATATTGCAGAAGAAGCAGGGGAGTTAATAAAGCAGTCACAAAATCATTCACCATTGTGATTAGTAGTAACACATTGGAAATCCGCTTATATTGGGCTGGAAAAGAGACAATTGGTATTCCATTTAAGTCCGTATATGGTCGTCTTATATCAGCTATACCTGTAAATCCCAACTTCATCCTTTCCTCAGAAAATGGAAGTAGCATGTCTGCAGGTTCCGTGGCTGCAATTGTGGCTGGTGTAGTAGTTTTTCTTGTGCTGGTATTTGAGATCTACAATCTTTCTTTGTTTGAATTTACAGAGCTAAAGGGTTTAAAACTGCAAATGGGTATATTTACCTTACGACAAATCAAAGCAGCAACAAACAACTTCAACAAAGCCAACAAAATTGGAGAAGGAGGGTTTGGTCCTGTGTACAAAGGAAATTTATCAGATGGGACAATAATAGCAGTCAAGCAGCTTTCTTCAAAATCAAGGCAAGGGAACCGCGAGTTTCTAAACGAGTTAGGCATGATTTCAGCTTTGCAACACCCTTGTCTTGTTAAACTCTATGGCTGTTGTGTCGAGGGAGATCAGTTATTGTTGGTATATGATGAATATATGGAAAACAATAGCCTTGCTCGGACTTTGTTTGGTCCAGCAGAATACCACATTAAATTGGATTGGCCAACAAGGCAAAAGATATGTGTTggtattgctagagTTGGTAGAAGATTGGGTTTGGACTTCTACAAAAACGAGGTTACAGCGAGGATCAACGTGTCTCTTTTATGCACCAATGTCACAGCCTCCCTCAGGCCAACAATGTCCTTAGTGGTAAGCATGCTTGAAGGTAGATCTGTGGTTCAGGAGGTGTTTTCAGAGTCAAGTGAGGCATTGGATGAGAAGAAGTTGGAGGCGATGTGA 1248 0.4014 MHAKVFLIYDSALSANPLTGLIPAEVANISPLQSLTLEFNQLSRNLPPELGNLPNLQRLLLTSNNFTGELPTTFPRLTTLQDVILRSCNINGTIPEYLGTNLVYKPWKYGAEGFQYCRRSRGVNKAVTKSFTIVISSNTLEIRLYWAGKETIGIPFKSVYGRLISAIPVNPNFILSSENGSSMSAGSVAAIVAGVVVFLVLVFEIYNLSLFEFTELKGLKLQMGIFTLRQIKAATNNFNKANKIGEGGFGPVYKGNLSDGTIIAVKQLSSKSRQGNREFLNELGMISALQHPCLVKLYGCCVEGDQLLLVYDEYMENNSLARTLFGPAEYHIKLDWPTRQKICVGIARVGRRLGLDFYKNEVTARINVSLLCTNVTASLRPTMSLVVSMLEGRSVVQEVFSESSEALDEKKLEAM 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02234 415 ProSiteProfiles Protein kinase domain profile. 238 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02234 415 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 12 100 - -
Gma06g02234 415 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 12 100 - -
Gma06g02234 415 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 190 348 - -
Gma06g02234 415 SUPERFAMILY L domain-like 13 100 - -
Gma06g02234 415 Pfam Protein tyrosine and serine/threonine kinase 241 333 IPR001245 GO:0004672|GO:0006468
Gma06g02234 415 Gene3D Ribonuclease Inhibitor 9 104 IPR032675 -
Gma06g02234 415 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 190 348 - -
Gma06g02234 415 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 352 401 - -
Gma06g02234 415 SUPERFAMILY Protein kinase-like (PK-like) 224 348 IPR011009 -
Gma06g02234 415 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 352 401 - -
Gma06g02234 415 Gene3D Transferase(Phosphotransferase) domain 1 218 353 - -
Gma06g02234 415 SMART tyrkin_6 238 412 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02234 Gma-Chr6 40998616 41007474 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02234 18 99 Receptor kinase-like Gene Family AT1G53420 36.585 6.78e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma06g02234 PK_Tyr_Ser-Thr 9.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02234 - - oeu:111370167 302.367