Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02212 atgatcaatatagtGTCTAGGAATGAATGTCGTGATGACGATGCAAAGAACTGGATAAATAGTGCCTACAATTTAAATATTTCATTGGTATACATCTATGCTGCACTTGAAGTAGCTAGATTTGGTTGCACTTTGAGTGAGGTTGACATATTGGATGATGGGTACTACTGGCGTAAGTATGGCCAAAAGGTTGTGAGAGGCAATCCTAACCCAAGGAGCTATTACAAATGCACAAATGCTGGTTGCCCTGTCAGAAAACATGTGGAGAGGGCATCTCATGATCCAAAAGCAGTGATAACCACATATGAGGGTAAACACAATCATGATGTACCAGCTGCAAGGAATAGCAGCCATGACATGGCAGTACCAGCAGTTGCAGCAGGTGGACAGACAAGAACTAAGTTAGAAGAAAGTGATACCATTAGCCTTGACCTTGGAATGGGAATTACCTCAGCTGCTGAACATAGGTCAAATGGGCAAGGGAAAATGCTGCATTCAGAGTTTGGGGACACATAA 516 0.4186 MINIVSRNECRDDDAKNWINSAYNLNISLVYIYAALEVARFGCTLSEVDILDDGYYWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAARNSSHDMAVPAVAAGGQTRTKLEESDTISLDLGMGITSAAEHRSNGQGKMLHSEFGDT 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02212 171 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 25 171 - -
Gma06g02212 171 Gene3D WRKY domain 39 112 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g02212 171 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 25 171 IPR044810 GO:0003700
Gma06g02212 171 SMART WRKY_cls 51 110 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g02212 171 Pfam WRKY DNA -binding domain 52 109 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g02212 171 ProSiteProfiles WRKY domain profile. 46 111 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g02212 171 SUPERFAMILY WRKY DNA-binding domain 44 111 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02212 Gma-Chr6 40415111 40418658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02212 44 158 WRKY Transcription Factor Family AT4G26640 70.940 1.75e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma06g02212 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02212 - - gmx:100785123 290.426