Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02211 ATGGGTGATATTAGCTTGAGGCTATGGTTGGATAAACCTGAACGATCAGTGAATGTCTTTGAATGCTTGCACATATTCAGGGAAATAGTAGAAATTGTTCATGCGGCTCATTCTCAAGGAATTGTTGTTCATAATGTGAGGCCCTCCTGCTTTGTCATGTCAGCTTTCAACCATGTCTGGCTTATCGAGTCAGCGACTTGTTCACATTCTGGATCAGATACATTAGAAGAGGCTGTTGAGATCAAAACTCCAACACCTACCTCTATCCATGATATGCATCAGCGGAGATGTTTAGGAAGTGAAGATTTTGTGCCTGTCAAGACTTCAACAGCTTCTTTGACAGACTCCAGTTGCATGTTGTCAAGTGTGGTGTTTCTGGCACCTGCATCATCAGTTGATGACACAGAAGAAAATAAAATGAAAAACAGGAGAAAGGATGAGGAAGTTGCAGGAAAGAAGCAATCATTTCCAACAAAACAGGTACTGCAGATGGAGACAAGTTGGTATACTAGTCCTGAAGAGGTTGCTGGTACTTCTTTGCCTTCCTGTGCTTCAGACGTTTACCAGTTGGGAGTTCTTCTTTTTGAGCTATTTTGTCCACTCATCTCAAGAGAAGAAAAGAGAAGAACCATGTCCAGCCTAAGACATAGAGTTCTTCCTCCACAGTTACTTTTAAAGTGGCCTAAAGAAGCTTCATTTTGCTTGTGGTTATTACATCCTGAGCCTAATAGTCGTCCAACAATAGGGGAGTTGTTGCAGAGTGAGTTTCTTAATGAACCAAGAGATGATATAGAAAAGTGTGAAGCAGCGGTAGAAATTGGAGAAAGGATAGATGACCAGGAGTTGTTGCTAGAATTCCTTTCGTTAATTCAACAGAAAAAAGGGGAAGCTGCTGAGAAGTTACAACATACTATCTCATTTTTGTGTTCAGATATTGAAGAAGCGACTAAGCAGAAAACTGTATTTAAAGAGATGACAAGCACTGAACTAGGGAGTGATGATTGTTCAACATCAAGTTTCCCATCCATTACTGTTGTTGGGAATGAGGATTCTGCTTGTCTAGGGACCAGAAAACGGGTCAGAACTATTCCGTGTGTTGATGACACTGACACTGAAGGATGTGAATGTGATAGTAACATGGTTGATGATCAGAAAAATGACATGAGTATTCTTTCAAAAACTCCACGGTTTTTGAATAATTTAAAGAAACTAGAGTCAGCATACTTTTTGACACGATGCAAATCTGCCTATTCCTCACGGAAACTTGTGGTTCAAGATTCACCTATTGATATTACTGATGAAAAAGGGTCTGTTGTTGTGGCTGAAAGGAATTATGCCAATAAAGTAGAATTAAAAGAGATGTCCAGGGAGGGCAAAAGTCCTTGGACAAATCCTTTCCTTGAGGGTTTGTGCAAGTACCTATCGTTCAGTAAGTTGAAGGTTAAGGCTGATCTTAAACAAGGGGATCTTTTGCAGTCTTCCAACCTGGTATGCTCACTCAGCTTTGATCGCGATGCAGAATTTTTTGCTACTGCGGGAGTAAATAAGAAGATTAAAGTTTTTGAATGTAACACAACCATAAATGAGTATCGTGATATCCACTATCCAGTAGTGGAGATGGTTAGCCGGTCAACATTGAGTAGTACATGTTGGAATACTTACATCAAGAGTCAAATTGCTTCGAGTAACTTTGAAGGTGTTGTACAGTTATGGGATGTGACAAGAAGTCAAGTGCAGTCTGAAATGAAGGAGCATGAACGAAGGGTATGGTCTATTGATTTCTCATCAGCAGACCCAACATTGTTAGCAAGTGGGAGTGATGACGGTTCTATGCATGATGGATTGTTTCCCTCACATGTGCTTTTACTGCAGGGAGTTAGTGTTGGTACCATCAAAACAAAGGCAAATGTGTGTTGTGTTCAGTTTCCCCTTGATTTTGCTCATTTCCTTGCATTTGGTTCAGCAGATCACCAGATATATTACTATGATCTTCGCAACCTGAAAGTGCCTCTTTGTGCAATGGTTGGACATGATAAGACAGTGAGCTACATCAAGTTTGTAGACACCATGAGCCTAGTCTCTGCATCCACAGATAACACATTGAAGCTTTGGGATTTGTCCATGTGTGCTTCTCGAGTTATAGACTCACCAATTCAATCATTCACTGGTCATAAGAATGTTAAGGTGTTCATATACCATAAGGCTTTTCCCATGCCAGCATTATCTTTCAAATTTTACAGTAGTGACCCTCTTTCTGGGAATGAAGAGGATGATTCGGCACAGTTCATCACTTCTGTTTGTTGGCGCGGTCAGTCATCCACCTTAGTGGCTGCAAATTCCACAGGAAATGTCAAAATTCTGGAGATGACTTAA 2373 0.4058 MGDISLRLWLDKPERSVNVFECLHIFREIVEIVHAAHSQGIVVHNVRPSCFVMSAFNHVWLIESATCSHSGSDTLEEAVEIKTPTPTSIHDMHQRRCLGSEDFVPVKTSTASLTDSSCMLSSVVFLAPASSVDDTEENKMKNRRKDEEVAGKKQSFPTKQVLQMETSWYTSPEEVAGTSLPSCASDVYQLGVLLFELFCPLISREEKRRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPEPNSRPTIGELLQSEFLNEPRDDIEKCEAAVEIGERIDDQELLLEFLSLIQQKKGEAAEKLQHTISFLCSDIEEATKQKTVFKEMTSTELGSDDCSTSSFPSITVVGNEDSACLGTRKRVRTIPCVDDTDTEGCECDSNMVDDQKNDMSILSKTPRFLNNLKKLESAYFLTRCKSAYSSRKLVVQDSPIDITDEKGSVVVAERNYANKVELKEMSREGKSPWTNPFLEGLCKYLSFSKLKVKADLKQGDLLQSSNLVCSLSFDRDAEFFATAGVNKKIKVFECNTTINEYRDIHYPVVEMVSRSTLSSTCWNTYIKSQIASSNFEGVVQLWDVTRSQVQSEMKEHERRVWSIDFSSADPTLLASGSDDGSMHDGLFPSHVLLLQGVSVGTIKTKANVCCVQFPLDFAHFLAFGSADHQIYYYDLRNLKVPLCAMVGHDKTVSYIKFVDTMSLVSASTDNTLKLWDLSMCASRVIDSPIQSFTGHKNVKVFIYHKAFPMPALSFKFYSSDPLSGNEEDDSAQFITSVCWRGQSSTLVAANSTGNVKILEMT 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02211 790 MobiDBLite consensus disorder prediction 135 155 - -
Gma06g02211 790 PANTHER PROTEIN SPA1-RELATED 3 2 790 - -
Gma06g02211 790 MobiDBLite consensus disorder prediction 135 153 - -
Gma06g02211 790 Gene3D - 468 790 IPR015943 GO:0005515
Gma06g02211 790 ProSitePatterns Trp-Asp (WD) repeats signature. 692 706 IPR019775 -
Gma06g02211 790 PANTHER PROTEIN SPA1-RELATED 2 2 790 IPR044630 GO:0009640
Gma06g02211 790 SUPERFAMILY Protein kinase-like (PK-like) 3 265 IPR011009 -
Gma06g02211 790 Coils Coil 298 318 - -
Gma06g02211 790 Gene3D Transferase(Phosphotransferase) domain 1 4 267 - -
Gma06g02211 790 ProSiteProfiles Trp-Asp (WD) repeats profile. 674 707 IPR001680 GO:0005515
Gma06g02211 790 SMART WD40_4 667 705 IPR001680 GO:0005515
Gma06g02211 790 SMART WD40_4 753 788 IPR001680 GO:0005515
Gma06g02211 790 SMART WD40_4 575 613 IPR001680 GO:0005515
Gma06g02211 790 SMART WD40_4 533 572 IPR001680 GO:0005515
Gma06g02211 790 SMART WD40_4 624 663 IPR001680 GO:0005515
Gma06g02211 790 SMART WD40_4 487 522 IPR001680 GO:0005515
Gma06g02211 790 Pfam WD domain, G-beta repeat 675 705 IPR001680 GO:0005515
Gma06g02211 790 Pfam WD domain, G-beta repeat 579 610 IPR001680 GO:0005515
Gma06g02211 790 SUPERFAMILY WD40 repeat-like 494 786 IPR036322 GO:0005515
Gma06g02211 790 ProSiteProfiles Protein kinase domain profile. 1 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02211 790 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 674 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02211 Gma-Chr6 40390218 40396875 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_PEK Gma06g02211 WD40 0.23 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02211 - - gmx:100784064 1526.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02211 06 40390218 40396875 Gma06g02211 06 40390218 40396875 ECH