Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02203 ATGAGCAGCTGCTTTGGTTATTGCAATTATTACCATGACCTTCGATCTAATAAGATGAATGTGTTCTGCGTAGACTATGCACTTAGGATGTGTAGGCACTGTAAGGAAGCTCATTCCCTACATAGAAGGTTTCAGATTTACAAATATTCCTACCCGGATGTCTTCCGCCATGCCGAGCTACAGAAGTATTTTGATTGCTCCAAAATTCAGAAGGGGGTGGGAGACAAGGCATTGAATCAACTAGAAAAATCAATTAGTTCAAAACTTGAAGCTATAGTGGCTAGGCAGATAAGCAAGCTCTTCAGATTAGCAGCTTCTGTTCTTTTGAGAAGGAATGTAAAAGGTGAAATCCCACTTAAGCTTAGCAATATACAAGCATTAACAGAGTTGTACTATGCAAGTCATCAATTGACAGAAAAGAGTGATGTGTACAGTTTTGGAGTTGTTCTACTAGAATTGATTTCTGGAAAAAAGCCTTTGTCATCTGAAGATTATGGTAACGAAATGAACATTGTTCATTTGGCAAGATCCTTAACTTGTAAAGGAGATGCAATGAGCATCATTGACCCTTCTCTAGAAGGGAATGCCAAAACCGAGTCCATTTGGAGGGTGGTTGAAATTGTCATGCCATGTGTAGAACAACATGGTGGTCATGATCGAGCTTAG 666 0.3949 MSSCFGYCNYYHDLRSNKMNVFCVDYALRMCRHCKEAHSLHRRFQIYKYSYPDVFRHAELQKYFDCSKIQKGVGDKALNQLEKSISSKLEAIVARQISKLFRLAASVLLRRNVKGEIPLKLSNIQALTELYYASHQLTEKSDVYSFGVVLLELISGKKPLSSEDYGNEMNIVHLARSLTCKGDAMSIIDPSLEGNAKTESIWRVVEIVMPCVEQHGGHDRA 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02203 221 Gene3D Transferase(Phosphotransferase) domain 1 122 218 - -
Gma06g02203 221 Pfam Protein tyrosine and serine/threonine kinase 134 163 IPR001245 GO:0004672|GO:0006468
Gma06g02203 221 SUPERFAMILY Protein kinase-like (PK-like) 131 213 IPR011009 -
Gma06g02203 221 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 76 - -
Gma06g02203 221 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02203 Gma-Chr6 40240875 40252217 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02203 131 220 Receptor kinase-like Gene Family AT1G67720 67.778 1.17e-34 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gma06g02203 PK_Tyr_Ser-Thr 1.3e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02203 - - gmx:100790944 154.836