Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02192 ATGGAGTTTCAAAAACCTCTATGGCTATTCTTGCTTCTCCTCACTCTCCTCTCAAGCTCCCAAGCCAACAAATTCAACGTTGGTGGAAGCAAAGGGTGGGTTCCAAACCCTTCCGAGAGTTACAACAATTGGGCTGGAAGAAACCGATTCCAAATCAATGACACAATAGTTTTCAAGTACAATAAGGGTTCGGATTCGGTGTTGGAAGTGAAGAAGGAAGATTACGACAAGTGCAACAAGACCAACCCAATCAAAAAGTTTGAAAACGGTGACACTGAATTCAAGTTTGATCGATCAGGACCATTCTACTTCATTAGTGGAAAAGATGGGAACTGTGAAAAGGGTCAAAAATTAATCGTTGTTGTTTTGACCCCAAGAACACCACCAACACCAAAAACACCACCGTTTCCAAAAACTTCACCTTCACCTTCACCTTCACAATCTCCAAAGGCAAACCCACCAACCGTATCGCCGCCGTTACCGTCACCGTCACCATCGGTTCAACCTCCTTCAACATCCCCATCTCCGGCGAGTTCTCCTGTGCCGGCCGTCGGACATCCGGCAGTATCTCCGTCGCCGGAGTCATTTACTCCGGCGATATCTCCGGTGAACTCTACTCCGACACCGGCACCGGAGACGGGGACTCcaccgccatctcttggtccttcatcatcttcaccaccgtctccgggtccttcatcatcttcaccgccgtctccgggtccttcatcatcttcaccgccgCCGGCGGGGCCAACTTCACCGCCGTCGTTAGCACCGTCGTCTAATTCAACTGCGCCGTCACCGAAGAACAGTGGATTTTCTGTGGCTCCTTCAAGCGTTTTGATGTATTGTGTTACAATTGTTGCTGGTGCTGCGTTGTTGCGTTATTGA 894 0.4329 MEFQKPLWLFLLLLTLLSSSQANKFNVGGSKGWVPNPSESYNNWAGRNRFQINDTIVFKYNKGSDSVLEVKKEDYDKCNKTNPIKKFENGDTEFKFDRSGPFYFISGKDGNCEKGQKLIVVVLTPRTPPTPKTPPFPKTSPSPSPSQSPKANPPTVSPPLPSPSPSVQPPSTSPSPASSPVPAVGHPAVSPSPESFTPAISPVNSTPTPAPETGTPPPSLGPSSSSPPSPGPSSSSPPSPGPSSSSPPPAGPTSPPSLAPSSNSTAPSPKNSGFSVAPSSVLMYCVTIVAGAALLRY 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02192 297 Gene3D - 21 126 IPR008972 -
Gma06g02192 297 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 1 295 - -
Gma06g02192 297 MobiDBLite consensus disorder prediction 194 208 - -
Gma06g02192 297 PRINTS Proline rich extensin signature 126 138 - -
Gma06g02192 297 PRINTS Proline rich extensin signature 138 159 - -
Gma06g02192 297 PRINTS Proline rich extensin signature 159 175 - -
Gma06g02192 297 PRINTS Proline rich extensin signature 191 216 - -
Gma06g02192 297 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Gma06g02192 297 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Gma06g02192 297 MobiDBLite consensus disorder prediction 124 276 - -
Gma06g02192 297 MobiDBLite consensus disorder prediction 209 256 - -
Gma06g02192 297 PANTHER BLUE COPPER PROTEIN 1 295 IPR039391 GO:0009055
Gma06g02192 297 MobiDBLite consensus disorder prediction 127 181 - -
Gma06g02192 297 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Gma06g02192 297 CDD OsENODL1_like 24 123 IPR041846 -
Gma06g02192 297 MobiDBLite consensus disorder prediction 257 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02192 Gma-Chr6 39960293 39961821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02192 3 206 Phytocyanin Superfamily AT5G53870 51.429 5.98e-58 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02192 - - gmx:100795901 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02192 06 39960293 39961821 Gma06g02192 06 39960293 39961821 ECH