Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02190 ATGGCATTGATACTAAAAAGTGTTGTCTTATTTCTTCTGTTTTTTTCAAATAATGAGATTGCCTTCAATGAGGATATCATTGAGGAAAGAGAGGAAGGCATTCAAGAAATCCAGTCGCAGATTGGTGAAGTAAATGAGATTTTCAAAGATCTTGCTGTGCTTGTCCATGAGCAGGGAGCAATGATTGATGATATCGGGTCCAATATTGAGCATTCCCATGAGGCAACTGTGCAAGCAAAATCTCAACTTGCCAAGGCTTCAAAGACGCAAAGATCAAATTCATCTTTGAGGTTGGAAGTGATGCATGAATTGAATCCCTCGATGAATTCAAATTTGGTTGAAATATTGAAATCAGAAGCTAACAAAGGCAAAGCAAGGAAGAGGTCTAGTTGTAGTAAAGCCTTTCTTTGGCTCACTAGTTCCCTGGATTTCTCCTCAGCATTATTACAATCACTAGAAAACGATCCTAAAAAGGATTTGGAGCAAATAGTTCAAGAATGTTATGATGCAACCTTGTCACCATGGCATGGATGGATTTCGTCAGCGGCTTTCAGAGTGGCTAAAAAACTAGTGCCATATAGTAAAACTTTCATGGATCTCCTCAAGGAAAAAGATGAAAACTGTGAAACCCTAAAGGACAAAATGCAGATCTTGGTTTCCTTGCTTGTGCCATTTTTTGATGATGTTCATTGTATTCTTGTGCAATGGGATGCCATAGTAGAAGACAAAATGCATTCTGAATTTGTTGTTTGTTTCGAGTTAGGTATTTTAAGGTTTTCATGTTTTTTTGAGGTGTAG 798 0.3772 MALILKSVVLFLLFFSNNEIAFNEDIIEEREEGIQEIQSQIGEVNEIFKDLAVLVHEQGAMIDDIGSNIEHSHEATVQAKSQLAKASKTQRSNSSLRLEVMHELNPSMNSNLVEILKSEANKGKARKRSSCSKAFLWLTSSLDFSSALLQSLENDPKKDLEQIVQECYDATLSPWHGWISSAAFRVAKKLVPYSKTFMDLLKEKDENCETLKDKMQILVSLLVPFFDDVHCILVQWDAIVEDKMHSEFVVCFELGILRFSCFFEV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02190 265 SMART tSNARE_6 19 86 IPR000727 -
Gma06g02190 265 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 97 236 - -
Gma06g02190 265 Pfam Glycolipid transfer protein (GLTP) 97 202 IPR014830 GO:0005737|GO:0120009|GO:0120013
Gma06g02190 265 ProSitePatterns Syntaxin / epimorphin family signature. 30 69 IPR006012 GO:0005484|GO:0006886|GO:0016020
Gma06g02190 265 PANTHER GLYCOLIPID TRANSFER PROTEIN (GLTP) FAMILY PROTEIN 97 236 - -
Gma06g02190 265 Gene3D - 15 55 - -
Gma06g02190 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 24 86 IPR000727 -
Gma06g02190 265 Gene3D Glycolipid transfer protein 60 239 IPR036497 -
Gma06g02190 265 SUPERFAMILY Glycolipid transfer protein, GLTP 97 237 IPR036497 -
Gma06g02190 265 CDD SNARE_Qa 27 85 - -
Gma06g02190 265 SUPERFAMILY SNARE fusion complex 12 87 - -
Gma06g02190 265 Pfam SNARE domain 61 96 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02190 Gma-Chr6 39942601 39944853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02190 13 96 SNARE and Associated Proteins AT5G46860 71.429 2.28e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02190 - - gmx:100527808 261.922