Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02189 ATGAGGATGACGACTCACGCAGTGAAAGAAGAGATGGGTGATGACGTCGTTAACTGGTCTTCGTCTTCATTGACGTCAACGTTTGAAATGGTGGAGGACCCTCACACCAACCCCATTGTGTCGTGGAGCCAAACTTGCGATAGTTTTGTCATTTGGAACTTGCACGATTTCTCCAAAACCCTTCTTCCAAAGTACTTCAAGCACAACAATTTCTCAAGCTTCGTTCGCCAGCTCAACACCTATGGCTTTAGGAAGGTTGATTTGCTACTATTGACAATGACTTTTTAG 288 0.4444 MRMTTHAVKEEMGDDVVNWSSSSLTSTFEMVEDPHTNPIVSWSQTCDSFVIWNLHDFSKTLLPKYFKHNNFSSFVRQLNTYGFRKVDLLLLTMTF 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02189 95 Gene3D - 21 91 IPR036388 -
Gma06g02189 95 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 87 IPR027725 -
Gma06g02189 95 SMART hsfneu3 24 95 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma06g02189 95 SUPERFAMILY "Winged helix" DNA-binding domain 26 86 IPR036390 -
Gma06g02189 95 Pfam HSF-type DNA-binding 25 87 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma06g02189 95 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-9 17 87 - -
Gma06g02189 95 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma06g02189 95 PRINTS Heat shock factor (HSF) domain signature 23 46 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma06g02189 95 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma06g02189 95 ProSitePatterns HSF-type DNA-binding domain signature. 62 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02189 Gma-Chr6 39938389 39939182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02189 24 87 HSF AT2G26150 70.312 3.76e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Gma06g02189 HSF_DNA-bind 2.6e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02189 K09419 - gmx:100778060 141.739