Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02182 ATGACACACGACGTGTTCGTGAGCTTCCGCGGTGAAGACATACACACCAGCTTCACCGGTTTTCTTTTTCAAGCTCTTGGTAGAAAATGCACTATTGTGGTCTTCTCAATCAACTATGCTTTCTCAACTATTCGAAATAAGCTACAATATGCAGAGCTTGAAGATATTGTTGAAAAGATAATAACAAATATGTTGGGTCACAAATTTTCCAGTCTTCCAAATGATGATCTAGTTGAGATGGAATCTCGTGTTGAAGAATTAGCAAAGCTTTTACGTTTGGGGTCTGTTAATGACATTCAACTTGTGGGAATTAGTAGGATGGGTGGAATAGGAAAAACAACAATTGGTCATGCTTTTTATGTAGAAATCTCTCATCAATATGATTTTTGTTGTTTTATTGATGATAGATTTGCAATCTATGCAAGGGCATGGATAGTTCTTAATAATGTTGATCAAGTTGAACAACTAAAGATGTTTACAGGTAGTAGATGTACTTTGTTACGTGAATGCCTAGGGATAATTATATTGAGGAGACATGGAGTAgatgatgtttaccaagtccagactttagatcaagaacatgttgttcaattgttttgcaaaaatgctttcaaaagtaattatgctatgagtgattataaaaggttgacttgtgatgtattatcacatgcccaaggccattccgtagcaattgaagtattgggctcatccgtgtttggacgagatGTTAAGAGAAATTATAGTAAAAACATTATGGATGATGTACTGCAAATAAGTTTTGATGAGTTGGAGGATATTGAGAAGGAAATATTTTTGGATATTGCTTGCTTATTCTACTTACAGCCAGTGCAATATTTGATGGAAGTTATCCATTTTCGTGGATTTCATCTTGAAATGGCTTTCAATTTTGATTATAAAATCCTAGGTTTCCATTTTTCTAGAATTGCAGATTATCTTGAAGCCTTAGTTTTTAAAAATGAAAGCAGCTTTCCTCAAAACATAATAAGGGCGGATGCTCTATGCAAAATGAGTCACCGTAAGTTGCTCGTGCTTGACAAAATGAATTTTTCAGGAAGACTCGATAATCTTTCCAATGAATTACGATATCTTACTTGGGATATATACCCTTTTGAGGGTTTGCTGCCAAGTTTTGATCCGGACAAACTTGTTGGGTTGCTCTTGCCTAATAGCAACATCAAACAACTATGGGAAGACACAAAGACTGCAAAAGTCTTACCAAGTTACCACATTAGCATATTAGGCCTCAATTCTCTTGAATATTTGATTCTCAATGACTGTTCAAAACTCTATTTATTGCCTTCCTCGCCAATTTTCCCATGTATCTACAAACTTGATCTAAGTTTCTGTAATTTACTTCAAATCCCTGATGCTATCGGAAATTTGTGTTGCTTAGAAAGCCTAGATTTAAGTGGAAACAATTTTGCTGGACTGCTCAACCTCAAGGAGCTTTCCATACTGTTCCATTTAAACTTACAGCACTGCAAGCAGTTGAAACATTTGCCTGAGCTCCCTTCACGAATTGACTTCCCATCACACCTACTTACATGTTTTTCAAAGATGATACAAATTGTTCAGGTGTACATGCTCCTTCCTTCCTCCTCCCATCTCTCCTCCTATCTATTCTCTCTCCTTTTGTTTGTGTCAGAATTAGGAACTAACATACAGCTGTGTCTGCA 1697 0.3241 MTHDVFVSFRGEDIHTSFTGFLFQALGRKCTIVVFSINYAFSTIRNKLQYAELEDIVEKIITNMLGHKFSSLPNDDLVEMESRVEELAKLLRLGSVNDIQLVGISRMGGIGKTTIGHAFYVEISHQYDFCCFIDDRFAIYARAWIVLNNVDQVEQLKMFTGSRCTLLRECLGIIILRRHGVDDVYQVQTLDQEHVVQLFCKNAFKSNYAMSDYKRLTCDVLSHAQGHSVAIEVLGSSVFGRDVKRNYSKNIMDDVLQISFDELEDIEKEIFLDIACLFYLQPVQYLMEVIHFRGFHLEMAFNFDYKILGFHFSRIADYLEALVFKNESSFPQNIIRADALCKMSHRKLLVLDKMNFSGRLDNLSNELRYLTWDIYPFEGLLPSFDPDKLVGLLLPNSNIKQLWEDTKTAKVLPSYHISILGLNSLEYLILNDCSKLYLLPSSPIFPCIYKLDLSFCNLLQIPDAIGNLCCLESLDLSGNNFAGLLNLKELSILFHLNLQHCKQLKHLPELPSRIDFPSHLLTCFSKMIQIVQVYMLLPSSSHLSSYLFSLLLFVSELGTNIQLCL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02182 565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 274 IPR027417 -
Gma06g02182 565 ProSiteProfiles Leucine-rich repeat profile. 470 491 IPR001611 GO:0005515
Gma06g02182 565 PRINTS Disease resistance protein signature 420 436 - -
Gma06g02182 565 PRINTS Disease resistance protein signature 101 116 - -
Gma06g02182 565 Gene3D - 67 139 IPR027417 -
Gma06g02182 565 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 71 140 - -
Gma06g02182 565 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 175 296 - -
Gma06g02182 565 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 431 518 - -
Gma06g02182 565 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 431 518 IPR044974 GO:0006952
Gma06g02182 565 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 175 296 IPR044974 GO:0006952
Gma06g02182 565 SUPERFAMILY L domain-like 321 512 - -
Gma06g02182 565 Gene3D Ribonuclease Inhibitor 182 529 IPR032675 -
Gma06g02182 565 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 71 140 IPR044974 GO:0006952
Gma06g02182 565 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 331 409 - -
Gma06g02182 565 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 331 409 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02182 Gma-Chr6 39592695 39595840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02182 356 478 WRKY Transcription Factor Family AT5G45050 29.851 1.16e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02182 - - gmx:100778550 334.339