Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02177 ATGGTGCTGCAAAGATGCTACCCTATGGCTTTTGTGCAATGGGGTTTCTTGGCTTGCTTGCTTTGCTTTTCTGTGGGACTTGAAACCCTTGCCAGATCCTGTGACAAGCATGATCTAATGGCCCTGAAGGAATTTGCAGGCAATCTTACAAAAGGGTCTATCATCACAGAATGGTCAGATGATGTTGTCTGCTGCAAATGGACTGGGGTTTATTGTGATGATGTGGTTGATGGAGTAGCTGCTAGTAGAGTGTCCAAGTTGATTCTACCTGGAATGGACCTCAACGGCACGATTTCAAGTTCTTTAGCCTATCTAGATAAGCTAAAGGAGCTCAATCTTTCGTTCAATCGTCTCCAAGGTGAATTGTCTTCTGAGTTCTCTAATCTGAAGCAGTTACAAGTTCTTGACTTGAGCCACAATATGCTATCTGGACCAGTTGGTGGGGCATTTTCCGGTTTGCAATCCATTCAAATACTGAATATTTCTAGCAATTCATTTGTTGGAGACCTCTTCCATTTCGGGGGATTACAACATCTTAGTGCTCTCAACATAAGCAACAATTCATTCACCGGCCAGTTCAATTCACAAATTTGCAGCACCTCCAAGGGTATTCATATTCTTGATATATCCAAAAATCATTTTGCTGGTGGTCTTGAATGGTTGGGCAACTGTAGCACGTCTCTCCAAGAGTTACATTTGGATTCCAATTTATTTTCTGGCCCTCTTCCTGATTCTTTGTATTCAATGTCAGCCTTGGAGCAGCTCTCAGTCTCTGTGAACAACCTCTCTGGTCAATTAAGCAAGGAGCTAAGTAACCTCTCAAGCCTAAAATCTCTAATAATTTCTGGAAACCATTTTTCAGAGGAACTCCCAAATGTTTTTGGGAATCTTTTGAACCTTGAACAACTAATAGGAAACACCAATTCATTTTCTGGATCATTGCCTTCCACCTTGGCTTTATGCTCAAAACTCCGAGTGCTTGATCTTCGAAATAATTCTTTGACAGGTTCTGTTGCTCTTAATTTCTCTGGGTTGTCTAATCTTTTCACTTTGGATCTTGGTAGCAATCATTTTAATGGATCCCTTCCAAATTCCTTGTCCTATTGCCATGAATTGACAATGTTAAGCCTTGCTAAAAATGAATTAACTGGCCAAATCCCCGAGAGCTATGCAAACCTCACTTCCCTTTTGACTCTGTCTTTGTCAAACAATAGCTTTGAGAACTTATCTGGGGCACTTTATGTACTGCAGCAGTGCAAAAATCTCACCACTCTTGTCCTCACAAAGAATTTCCATGGTGAGGAAATTCCAGAAAAATTAACAGCAAGCTTCAAGAGCCTTGTGGTTTTAGCACTTGGAAATTGTGGTCTCAAAGGCCGTATTCCTGCCTGGCTATTGAATTGCCCGAAATTGGAAGTTCTTGATTTGTCTTGGAACCATTTGAAAGGTAGTGTCCCTTCTTGGATTGGTCAGATGGACCGTTTGTTCTACTTGGATTTGTCAAATAATTCTCTTACAGGAGAAATACCAAAAGGTTTGACACAGCTGAGGGGCCTCATATCCTCCAATTATCATATATCAAGTCTCTTTGCATCTGCTGCTATTCCTCTCTATGTCAAGAGAAACAAGAGTGCTAGTGGGCTGCAATATAACCATGCCTCAAGTTTCCCTCCTTCAATATACTTGAGCAATAACAGATTAAGTGGAACAATATGGCCTGAAATTGGTCGTTTAAAAGAACTTCATATCTTGGATTTAAGCAGGAACAACATCACCGGCACCATTCCTAGCTCTATTTCAGAGATGAAGAATTTGGAAACATTAGATTTATCTTATAATAGTCTCGTTGGAACTATTCCTCCATCATTTAACAGCCTCACATTCTTGTCTAAGTTCAGTGTAGCATATAACCACTTATGGGGATTAATTCCAATTGGAGGACAATTTTCAAGTTTCCCAAATTCAAGTTTTGAGGGCAACTGGGGGCTTTGTGGGGAAATATTTCATCATTGTAACGAGAAAGATGTGGGCTTGAGGGCCAACCATGTGGGAAAATTTAGTAAAAGCAATATCCTTGGCATAACAATTGGGTTAGGAGTTGGGCTTGCACTGCTTCTTGCTGTTATTCTGCTAAGAGTGTCAAAGAGGGACGAGGATAAGCCAGTTGATAACATTGATGAGGAGCTTAGCTGTCCAAACAGGAGGCCCGAAGCACTCACTTCTTCAAAATTGGTGTTTTTTAAGAATTCAGATTGCAAGGATCTCATAGTTGAAGATTTGTTAAAATCCACTGGCAATTTTAACCAAGAAAATATAATTGGTTGTGGTGGGTTTGGTCTTGTCTACAAGGGGAATCTTCCAAATGGCACAAAGGTAGCTATCAAGAAACTTTCAGGGTACTGTGGTCAGGTAGAACGTGAATTCCAAGCTGAAGTGGAGGCACTCTCAAGAGCTCAACATAAGAACCTTGTTTCACTTAAAGGTTATTGCCAGCATTTCAATGACAGATTATTAATTTACTCCTACTTGGAGAATGGAAGCCTTGACTATTGGCTGCATGAGAGTGAAGATGGAAATTCAGCTCTAAAATGGGATGCAAGACTCAAGATTGCCAAAGGTGCAGCTCATGGATTAGCTTATTTGCACAAGGAGTGTGAACCACATATCGTGCATCGTGATATTAAATCCAGCAACATACTTTTGGATGATAAATTCAAAGCTTATTTGGCTGACTTTGGTCTCTCAAGGCTACTTCAACCTTATGATACCCATGTTTCAACAGATTTAGTAGGAACTTTAGGATATATTCCTCCAGAATACAGTCAGGTACTGAAAGCAACTTTCAAGGGTGATATTTATAGCTTTGGTGTTGTTCTTGTTGAGCTTCTTACTGGTCGAAGGCCGGTAGAAGTCATCATCGGGCAACGTAGCAGGAATCTAGTGTCTTGGGTGTTGCAGATAAAATCTGAGAATAGGGAGCAGGAAATTTTTGATTCAGTCATTTGGCACAAGGATAATGAGAAACAGCTCTTAGAGGTACTAGCTATTGCTTGTAAATGTATAGATGAAGATCCAAGGCAGAGACCCCATATTGAATTAGTTGTTTCATGGCTTGATAATGTAGGATTTGATGGCTCTGAGCAGTCATCATTTTAA 3156 0.4037 MVLQRCYPMAFVQWGFLACLLCFSVGLETLARSCDKHDLMALKEFAGNLTKGSIITEWSDDVVCCKWTGVYCDDVVDGVAASRVSKLILPGMDLNGTISSSLAYLDKLKELNLSFNRLQGELSSEFSNLKQLQVLDLSHNMLSGPVGGAFSGLQSIQILNISSNSFVGDLFHFGGLQHLSALNISNNSFTGQFNSQICSTSKGIHILDISKNHFAGGLEWLGNCSTSLQELHLDSNLFSGPLPDSLYSMSALEQLSVSVNNLSGQLSKELSNLSSLKSLIISGNHFSEELPNVFGNLLNLEQLIGNTNSFSGSLPSTLALCSKLRVLDLRNNSLTGSVALNFSGLSNLFTLDLGSNHFNGSLPNSLSYCHELTMLSLAKNELTGQIPESYANLTSLLTLSLSNNSFENLSGALYVLQQCKNLTTLVLTKNFHGEEIPEKLTASFKSLVVLALGNCGLKGRIPAWLLNCPKLEVLDLSWNHLKGSVPSWIGQMDRLFYLDLSNNSLTGEIPKGLTQLRGLISSNYHISSLFASAAIPLYVKRNKSASGLQYNHASSFPPSIYLSNNRLSGTIWPEIGRLKELHILDLSRNNITGTIPSSISEMKNLETLDLSYNSLVGTIPPSFNSLTFLSKFSVAYNHLWGLIPIGGQFSSFPNSSFEGNWGLCGEIFHHCNEKDVGLRANHVGKFSKSNILGITIGLGVGLALLLAVILLRVSKRDEDKPVDNIDEELSCPNRRPEALTSSKLVFFKNSDCKDLIVEDLLKSTGNFNQENIIGCGGFGLVYKGNLPNGTKVAIKKLSGYCGQVEREFQAEVEALSRAQHKNLVSLKGYCQHFNDRLLIYSYLENGSLDYWLHESEDGNSALKWDARLKIAKGAAHGLAYLHKECEPHIVHRDIKSSNILLDDKFKAYLADFGLSRLLQPYDTHVSTDLVGTLGYIPPEYSQVLKATFKGDIYSFGVVLVELLTGRRPVEVIIGQRSRNLVSWVLQIKSENREQEIFDSVIWHKDNEKQLLEVLAIACKCIDEDPRQRPHIELVVSWLDNVGFDGSEQSSF 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02177 1051 SUPERFAMILY L domain-like 55 303 - -
Gma06g02177 1051 Gene3D Phosphorylase Kinase; domain 1 731 842 - -
Gma06g02177 1051 PRINTS Leucine-rich repeat signature 495 508 - -
Gma06g02177 1051 PRINTS Leucine-rich repeat signature 602 615 - -
Gma06g02177 1051 SMART LRR_typ_2 602 625 IPR003591 -
Gma06g02177 1051 SMART LRR_typ_2 492 516 IPR003591 -
Gma06g02177 1051 SMART LRR_typ_2 345 369 IPR003591 -
Gma06g02177 1051 SMART LRR_typ_2 393 416 IPR003591 -
Gma06g02177 1051 SMART LRR_typ_2 129 152 IPR003591 -
Gma06g02177 1051 SMART LRR_typ_2 273 296 IPR003591 -
Gma06g02177 1051 SMART LRR_typ_2 578 601 IPR003591 -
Gma06g02177 1051 SMART LRR_typ_2 105 128 IPR003591 -
Gma06g02177 1051 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Gma06g02177 1051 SMART LRR_sd22_2 602 628 - -
Gma06g02177 1051 SMART LRR_sd22_2 321 347 - -
Gma06g02177 1051 SMART LRR_sd22_2 105 128 - -
Gma06g02177 1051 SMART LRR_sd22_2 129 155 - -
Gma06g02177 1051 SMART LRR_sd22_2 578 601 - -
Gma06g02177 1051 SMART LRR_sd22_2 249 275 - -
Gma06g02177 1051 SMART LRR_sd22_2 393 411 - -
Gma06g02177 1051 Pfam Leucine rich repeat 107 165 IPR001611 GO:0005515
Gma06g02177 1051 Pfam Leucine rich repeat 446 505 IPR001611 GO:0005515
Gma06g02177 1051 Pfam Leucine rich repeat 323 382 IPR001611 GO:0005515
Gma06g02177 1051 Pfam Leucine rich repeat 580 639 IPR001611 GO:0005515
Gma06g02177 1051 Gene3D Ribonuclease Inhibitor 35 151 IPR032675 -
Gma06g02177 1051 SUPERFAMILY RNI-like 222 527 - -
Gma06g02177 1051 Gene3D Ribonuclease Inhibitor 392 677 IPR032675 -
Gma06g02177 1051 SUPERFAMILY Protein kinase-like (PK-like) 751 1038 IPR011009 -
Gma06g02177 1051 ProSitePatterns Serine/Threonine protein kinases active-site signature. 889 901 IPR008271 GO:0004672|GO:0006468
Gma06g02177 1051 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gma06g02177 1051 SUPERFAMILY L domain-like 548 664 - -
Gma06g02177 1051 Pfam Protein kinase domain 768 1034 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02177 1051 Gene3D Transferase(Phosphotransferase) domain 1 843 1044 - -
Gma06g02177 1051 SMART serkin_6 767 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02177 1051 ProSiteProfiles Protein kinase domain profile. 767 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02177 1051 Gene3D Ribonuclease Inhibitor 152 390 IPR032675 -
Gma06g02177 1051 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 616 1042 - -
Gma06g02177 1051 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 448 526 - -
Gma06g02177 1051 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 164 - -
Gma06g02177 1051 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 173 282 - -
Gma06g02177 1051 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 561 617 - -
Gma06g02177 1051 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 282 437 - -
Gma06g02177 1051 PANTHER PHYTOSULFOKINE RECEPTOR 2 448 526 - -
Gma06g02177 1051 PANTHER PHYTOSULFOKINE RECEPTOR 2 616 1042 - -
Gma06g02177 1051 PANTHER PHYTOSULFOKINE RECEPTOR 2 173 282 - -
Gma06g02177 1051 PANTHER PHYTOSULFOKINE RECEPTOR 2 282 437 - -
Gma06g02177 1051 PANTHER PHYTOSULFOKINE RECEPTOR 2 32 164 - -
Gma06g02177 1051 PANTHER PHYTOSULFOKINE RECEPTOR 2 561 617 - -
Gma06g02177 1051 ProSitePatterns Protein kinases ATP-binding region signature. 773 796 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02177 Gma-Chr6 39386789 39389944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02177 108 1051 Receptor kinase-like Gene Family AT1G55610 35.294 1.60e-164 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Gma06g02177 Pkinase 2.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02177 - - gmx:100791334 2008.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02177 06 39386789 39389944 Gma06g02177 06 39386789 39389944 ECH